Homer de novo Motif Results (ATAC/Echo002//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 5660
Total background sequences = 41300
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C 1e-16-3.812e+0132.14%26.76%280.4bp (275.9bp)Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer(0.688)
More Information | Similar Motifs Found
motif file (matrix)
2 G T A C A T C G A T C G T A C G T G C A C G T A G T C A G C T A C G T A T A C G 1e-14-3.231e+015.78%3.56%282.3bp (278.4bp)NFATC2/MA0152.1/Jaspar(0.745)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T T A G C C T G A C G T A C T A G G A C T A T G C A C T G A G T C A T C G 1e-12-2.895e+012.14%0.95%289.7bp (266.9bp)PH0111.1_Nkx2-2/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
4 C G A T G C T A A C G T G C A T G A T C T C G A G C T A T A C G C G T A A T G C 1e-12-2.895e+013.34%1.79%279.5bp (279.9bp)PB0178.1_Sox8_2/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
5 G A T C C G T A C G A T C G T A G T C A A G C T A C T G T A G C G C T A A G T C 1e-12-2.889e+012.58%1.25%280.1bp (284.2bp)ZNF143/MA0088.2/Jaspar(0.772)
More Information | Similar Motifs Found
motif file (matrix)
6 C A G T C G T A T C G A C T G A C T A G T G C A A C T G A C T G C A T G G T A C 1e-12-2.876e+013.78%2.12%286.2bp (295.3bp)RORC/MA1151.1/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
7 T A C G A T G C G A T C G A T C T C A G C T G A A G C T C A G T A G C T A T G C 1e-12-2.819e+013.09%1.63%271.6bp (285.7bp)PH0037.1_Hdx/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
8 * T C A G C A G T A C T G T C A G C G T A A G C T C T A G C A T G G T C A T G C A 1e-11-2.743e+014.40%2.63%282.5bp (282.8bp)NFATC4/MA1525.1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
9 * T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T 1e-11-2.739e+012.51%1.23%265.0bp (267.3bp)PITX1/MA0682.2/Jaspar(0.756)
More Information | Similar Motifs Found
motif file (matrix)
10 * T G A C A G C T G C T A C T G A C T G A G A C T A C T G T A C G A C T G G T A C 1e-11-2.622e+017.26%4.99%276.1bp (273.9bp)BARHL1/MA0877.2/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
11 * G T A C C A G T G T C A C A T G G T A C G C T A G T A C C G A T T C G A A T G C 1e-11-2.556e+011.75%0.75%309.3bp (282.0bp)ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer(0.571)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T 1e-10-2.474e+016.70%4.58%286.6bp (294.5bp)PB0055.1_Rfx4_1/Jaspar(0.724)
More Information | Similar Motifs Found
motif file (matrix)
13 * C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C 1e-10-2.396e+015.37%3.52%285.6bp (284.2bp)SOX18/MA1563.1/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T A G G A T C C G T A A C G T T G A C G C A T C A T G G A C T T G C A C G T A 1e-10-2.393e+013.80%2.27%278.9bp (264.6bp)Ptf1a/MA1618.1/Jaspar(0.768)
More Information | Similar Motifs Found
motif file (matrix)
15 * G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C 1e-10-2.360e+011.41%0.57%245.2bp (300.1bp)CUX2/MA0755.1/Jaspar(0.565)
More Information | Similar Motifs Found
motif file (matrix)
16 * G T A C A G T C A C G T T G C A T G A C G T C A C G T A C A T G A G C T A C G T 1e-10-2.338e+012.67%1.43%289.7bp (291.9bp)ZKSCAN1/MA1585.1/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
17 * T G C A C G A T G C A T T C A G A C T G A T C G T C A G A G C T A G C T A T G C 1e-9-2.297e+013.64%2.18%274.7bp (283.1bp)RUNX3/MA0684.2/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A C T G A G T C A C T G 1e-9-2.284e+0187.37%84.18%269.1bp (291.8bp)POL006.1_BREu/Jaspar(0.840)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C G T C A G T C A A C G T G C T A A T G C G C T A T G C A A C T G C T G A 1e-9-2.275e+016.11%4.18%274.1bp (287.0bp)Mecom/MA0029.1/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G A T T A G C A C G T T G C A A G T C T G A C T G A C T G C A C T G A A T C G 1e-9-2.239e+013.89%2.39%273.0bp (279.6bp)EBF3/MA1637.1/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C C A T G G C A T A T C G G A T C T G C A G C A T G A T C G C T A C T A G 1e-9-2.187e+012.19%1.13%260.7bp (283.3bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
22 * C T A G G C A T T G C A T A G C C G A T C G A T G T A C G A C T G T C A C A G T 1e-9-2.145e+012.28%1.20%259.9bp (278.1bp)PH0117.1_Nkx3-1/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T C A G C A T C T G A C T G A T C G A T A C G G C T A G A T C C A T G T C G A 1e-8-2.059e+0110.20%7.81%278.5bp (288.2bp)PH0044.1_Homez/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C G T A G T C C T A G G T A C C G T A A C T G A C G T G T C A C G A T G T A C 1e-8-2.006e+010.60%0.15%301.7bp (304.2bp)OSR1/MA1542.1/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A G T C A G T C C G T A A C G T A G T C A G T C A C G T C G T A A C T G 1e-5-1.159e+010.41%0.12%233.9bp (260.5bp)PB0181.1_Spdef_2/Jaspar(0.740)
More Information | Similar Motifs Found
motif file (matrix)
26 * A G T C A C G T A C T G A C T G 1e-4-1.104e+0198.94%98.21%284.1bp (289.2bp)Hand1::Tcf3/MA0092.1/Jaspar(0.845)
More Information | Similar Motifs Found
motif file (matrix)
27 * G T C A C G A T T C A G C G T A 1e-4-1.086e+0197.51%96.48%279.9bp (280.6bp)GATA5/MA0766.2/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
28 * G T A C G C A T C G T A T C A G 1e-4-1.049e+0198.82%98.08%284.3bp (290.9bp)Smad4/MA1153.1/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
29 * C T G A A C T G C G T A C T A G 1e-2-5.182e+0098.85%98.41%285.2bp (289.4bp)Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer(0.714)
More Information | Similar Motifs Found
motif file (matrix)