Information for 13-GACACTATGC (Motif 13)

C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C
Reverse Opposite:
C A T G G T A C G C T A C G A T C T G A A C T G G C A T T A C G G C A T G A T C
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.648
Number of Target Sequences with motif304.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif1455.0
Percentage of Background Sequences with motif3.52%
Average Position of motif in Targets498.3 +/- 285.6bp
Average Position of motif in Background501.5 +/- 284.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX18/MA1563.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GACACTATGC
--CACAATGC
 C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACACTATGC
GACAATGNN-
 C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACACTATGC
TTGACAG-----
 A C G T A C G T C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GACACTATGC---
CTCACACAATGGCGC
 A C G T A C G T C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACACTATGC--
-AAACAATGGCA
 C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T A C G T
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

NFIB/MA1643.1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GACACTATGC------
NNCTTGGCACNATGCCAGGNN
 A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A C T C A G T T C A G T A C G T G A C G C T A A G T C G T C A T C G A C G A T A C T G G A T C T A G C G T C A C T A G T C A G G A T C G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GACACTATGC
ARNTGACA------
 A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GACACTATGC----
-----TATGCAAAT
 C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GACACTATGC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GACACTATGC--
-AAACAATGGAA
 C T A G C G T A A T G C C G T A T G A C G A C T G C T A C G A T C A T G G T A C A C G T A C G T
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A