Information for 1-GGCG (Motif 18)

A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.530
Number of Target Sequences with motif4944.0
Percentage of Target Sequences with motif87.37%
Number of Background Sequences with motif34763.4
Percentage of Background Sequences with motif84.18%
Average Position of motif in Targets656.4 +/- 269.1bp
Average Position of motif in Background645.0 +/- 291.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)3.83
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGCG----
GGCGCGCT
 A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------GGCG-------
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------GGCG-------
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

YY2/MA0748.2/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGCG---
AGATGGCGGCG
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

SP9/MA1564.1/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GGCG----
GGGGGGCGTGGN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G T C A G C A T G C T A G C T A G C A T G A G T C T A C G C A G T C A T G C A T G A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GGCG-------
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGCG-----
BTKGGCGGGAAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F1/MA0024.3/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGCG-----
TTTGGCGCCAAA
 A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

KLF6/MA1517.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGCG-----
TGGGCGTGGCN
 A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G A T C G A C T G A G T C C T A G A C G T A C T G A C T G A G T C T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------GGCG-------
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G