Information for 15-CTCGMCTATC (Motif 15)

G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C
Reverse Opposite:
T A C G T C G A C A G T C T G A T A C G A C G T G T A C C T A G C T G A C A T G
p-value:1e-10
log p-value:-2.360e+01
Information Content per bp:1.614
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif235.2
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets504.7 +/- 245.2bp
Average Position of motif in Background528.3 +/- 300.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX2/MA0755.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCGMCTATC
TTATCGATTA--
 A C G T A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCGMCTATC------
AATAGGGTATCAATTAT
 A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCGMCTATC
NTATCGATTA--
 A C G T A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTCGMCTATC
NNACTTGCCTT--
 A C G T A C G T A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCGMCTATC------
GATAGGGTATCACTAAT
 A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCGMCTATC------
GATAGGGTATCACTAAT
 A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTCGMCTATC
GKMTCADRTTWC
 A C G T A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

ZNF135/MA1587.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCGMCTATC---
CCTCGACCTCCTGA
 A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T
A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTCGMCTATC---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCGMCTATC------
GATGGGGTATCATTTTT
 A C G T G T A C A G C T G A T C A C T G T G C A A T G C G A C T G T C A A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T