Information for 1-ATTCATTTGC (Motif 1)

G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C
Reverse Opposite:
A C T G G T A C C G T A T G C A G T C A A C G T A C T G T G C A G C T A C A G T
p-value:1e-16
log p-value:-3.812e+01
Information Content per bp:1.648
Number of Target Sequences with motif1819.0
Percentage of Target Sequences with motif32.14%
Number of Background Sequences with motif11052.0
Percentage of Background Sequences with motif26.76%
Average Position of motif in Targets479.6 +/- 280.4bp
Average Position of motif in Background472.6 +/- 275.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATTCATTTGC---
-CTCATTTGCATW
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T A C G T A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATTCATTTGC----
-TTCATTTGCATAT
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTCATTTGC--
ACATTCATGACACG
 A C G T A C G T G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTCATTTGC
TTTCATTRCC
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

ONECUT1/MA0679.2/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCATTTGC-
NNTTTATTGATTTTTT
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTCATTTGC
TTTCATKGCC
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C
G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTCATTTGC
ATTGATTYND
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTCATTTGC------
TNTAATTTGCATANNN
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATTCATTTGC-
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T A C G T G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATTCATTTGC-----
--NNATTTGCATATN
 G T C A C G A T A C G T T G A C T G C A C A G T A C G T G C A T C A T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T