Information for 12-TTGCTACGCT (Motif 12)

C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T
Reverse Opposite:
T G C A C A T G A G T C A C T G C A G T G C T A A T C G G A T C G C T A G C T A
p-value:1e-10
log p-value:-2.474e+01
Information Content per bp:1.540
Number of Target Sequences with motif379.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif1892.4
Percentage of Background Sequences with motif4.58%
Average Position of motif in Targets546.3 +/- 286.6bp
Average Position of motif in Background546.0 +/- 294.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTGCTACGCT-
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTGCTACGCT-
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-8
Orientation:reverse strand
Alignment:--------TTGCTACGCT-----
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTACGCT----
TNNTGCTACTGTNNNN
 A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTACGCT
CTGTTGCTAGGS-
 A C G T A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACGCT
AATTGATACATT
 A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTACGCT----
CNNNGCTACTGTANNN
 A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

OSR1/MA1542.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGCTACGCT-
-TGCTACTGTT
 C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T
A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

RFX7/MA1554.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGCTACGCT
CGTTGCTAT---
 A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGCTACGCT-
CTGTTGCTATGGCA
 A C G T A C G T A C G T C G A T C G A T C T A G T A G C C G A T G T C A T G A C T C A G G T A C A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A