Information for 5-CTAG (Motif 28)

G T A C G C A T C G T A T C A G
Reverse Opposite:
A G T C C G A T C G T A C A T G
p-value:1e-4
log p-value:-1.049e+01
Information Content per bp:1.649
Number of Target Sequences with motif5592.0
Percentage of Target Sequences with motif98.82%
Number of Background Sequences with motif40501.9
Percentage of Background Sequences with motif98.08%
Average Position of motif in Targets514.2 +/- 284.3bp
Average Position of motif in Background511.0 +/- 290.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)3.74
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTAG---
TCTAGACA
 A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------CTAG----
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTAG---
CGTCTAGACA
 A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------CTAG-----
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTAG---
TGTCTAGACA
 A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTAG-
GTTAACTAGN
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------CTAG-----
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTAG-------
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTAG-------
ACATGCTACCTAATAC
 A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0181.1_Spdef_2/Jaspar

Match Rank:10
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------CTAG---
GATAACATCCTAGTAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C A T C G T A T C A G A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G