Information for 3-CTGG (Motif 26)

A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.104e+01
Information Content per bp:1.530
Number of Target Sequences with motif5599.0
Percentage of Target Sequences with motif98.94%
Number of Background Sequences with motif40555.3
Percentage of Background Sequences with motif98.21%
Average Position of motif in Targets545.4 +/- 284.1bp
Average Position of motif in Background540.0 +/- 289.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)6.63
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---CTGG---
GGTCTGGCAT
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CTGG---
WDNCTGGGCA
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZBTB26/MA1579.1/Jaspar

Match Rank:3
Score:0.76
Offset:-7
Orientation:reverse strand
Alignment:-------CTGG----
NNNNTTTCTGGAGNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGG-
GCTGTG
 A C G T A G T C A C G T A C T G A C T G A C G T
T A C G T A G C C A G T A T C G G A C T A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.72
Offset:-8
Orientation:reverse strand
Alignment:--------CTGG-----
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTGG
CTGTCTGG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

TWIST1/MA1123.2/Jaspar

Match Rank:7
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CTGG---
NNACATCTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CTGG------
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTGG----
NTTGGCANN
 A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTGG-
AACATCTGGA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A