Information for 9-GGATTACTGT (Motif 9)

T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
Reverse Opposite:
C T G A A T G C G C T A T C A G C A G T C G T A T C G A G C A T A G T C A G T C
p-value:1e-11
log p-value:-2.739e+01
Information Content per bp:1.816
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif509.0
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets465.6 +/- 265.0bp
Average Position of motif in Background465.0 +/- 267.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX1/MA0682.2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTGT
NGGATTAN---
 A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTGT
GGGATTAN---
 A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACTGT
NGGGATTA----
 A C G T A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------GGATTACTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------GGATTACTGT-
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTGT
GGGATTANN--
 A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACTGT
CGGATTAN---
 A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GGATTACTGT
AAGGGATTAGAA-
 A C G T A C G T A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGATTACTGT
RGGATTAR---
 A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:10
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGATTACTGT--
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C G T T C A G A C T G C G T A A G C T A C G T G T C A A G T C C G A T T A C G G A C T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T