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Regulation
Ant
Turtle
WGNCA
AnalysisDEG
Lion
Liger
Part02: Regulation
  • Specie
  • Region
  • Tissue
  • Devo
  • Diz
  • Space
Regulation network of species
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    Regulation network of regions
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      Regulation network of tissues
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        Regulation network of devo
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          Regulation network of diz
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            Regulation network of space
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              Part04: Ant, Association Network infered from Transcriptome
              • Ant
                • Select
                • BriefIntro
                • Remark
                • GeneNum
                • GeneList
                • Association
                Putative positive regulators of
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                • Symbol
                • Correlation
                • P value
                • Adjusted P value
                Putative negative regulators of
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                • Symbol
                • Correlation
                • P value
                • Adjusted P value
                Part05: Turtle, TimeScale Unbiased Review of cellType and Lineage Expression
                • Turtle
                Part06: WGNCA, Weighted correlation network analysis
                • Specie
                • Region
                • Devo
                • Diz
                WGCNA modules
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                  Gene list associated WGCNA modules
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                    WGCNA modules
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                      Gene list associated WGCNA modules
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                        WGCNA modules
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                          Gene list associated WGCNA modules
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                            WGCNA modules
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                              Gene list associated WGCNA modules
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                                Part07: AnalysisDEG, Analysis of gene set expression difference
                                • Specie
                                • Region
                                • Tissue
                                • Devo
                                • Diz
                                • Space
                                DEG
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                                  DEG
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                                    DEG
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                                      DEG
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                                        DEG
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                                          DEG
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                                            Part08: Lion, LIst of genes ONtology enrichment
                                            • Lion
                                            Mode 1: select BSID
                                            {{ tabName }}
                                            • Classification
                                            • Species
                                            • Tissue
                                            Dataset information

                                            BSID: {{dataInfo.BSID}}

                                            Classification: {{dataInfo.Classification}}

                                            CommonName: {{dataInfo.CommonName}}

                                            LatinName: {{dataInfo.LatinName}}

                                            BrainRegion:{{dataInfo.Region}}

                                            Timing:{{dataInfo.Timing}}

                                            Diseases: {{dataInfo.Diseases}}

                                            Tech: {{dataInfo.Diseases}}

                                            CellNum: {{dataInfo.Tech}}

                                            Title: {{dataInfo.Title}}

                                            Journal: {{dataInfo.Journal}}

                                            PMID: {{dataInfo.PMID}}

                                            Matrix Download : Click to download

                                            Shinycell: View data

                                            Mode 2: select gene list
                                            • Gene List
                                            • scRNASeq
                                            • Spatial Transcriptomics
                                            Input Genes
                                            Choose a subsection
                                            • Dimensions
                                            Enter your own Gene symbols
                                            Only .csv and .h5ad file types accepted for online analysis. Download Demo (Detail of Demo dataset ).
                                            Only .csv and .h5ad file types accepted for online analysis. Download Demo (Detail of Demo dataset ).
                                            Top 10 Enriched Dimensions
                                              Top 30 Enriched Dimensions
                                              List of Enriched Dimensions
                                              • Tag
                                              • Intersect gene num
                                              • p val
                                              • p val adj
                                              Part09: Liger, LInks to Gene Expression Resources
                                              • Liger
                                              Regulation network
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                                                Regulation
                                                Ant
                                                Turtle
                                                WGNCA
                                                AnalysisDEG
                                                Lion
                                                Liger