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iPSC_Human
iPSC_Human includes detailed profiles of human iPSCs, focusing on their applications in organoid studies and developmental biology. This module supports research on human cell differentiation and regeneration, providing insights into organ-specific development and disease modeling.
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DataInfo&Gene
HomoGene
GeneSets&TF
Stats&Anno
TimeScaleReview
Enrichment
Part 1: DataInfo&Gene, Expression atlas at gene level
  • Information
  • GeneSet Exp
Explore data at the single-gene level (2000 cells sampled)
Features
Explore data at the gene set level
    • Select
    • BriefIntro
    • Remark
    • GeneNum
    • GeneList
    Gene set expression



    Part 3: HomoGene, Files of the homologous gene conversion process
    • Homologous Gene
    • Faa
    • Gtf
    Table
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    entries
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      Part 4: GeneSets&TF, Association network infered from transcriptome
      • Explore data at the gene set level
        • Select
        • BriefIntro
        • Remark
        • GeneNum
        • GeneList
        • Association
        Putative positive regulators of
        Show
        entries
        Search:
        • Symbol
        • Correlation
        • P value
        • Adjusted P value
        Putative negative regulators of
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        entries
        Search:
        • Symbol
        • Correlation
        • P value
        • Adjusted P value
        Part 5: Stats&Anno, Sample-wise statistics & annotation
        • Statistics
        • Celltype Annotation
        • Celltype&Clustering DEG
        Image
        Image
        Image
        Image
        Image
        Image
        The DEG of CellType
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        entries
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          The DEG of leiden cluster
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          entries
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            Part 6: TimeScaleReview, Timescale unbiased review of celltype and lineage expression
            • Cross species expression
            Part 7: Enrichment, Enrichment of gene list
            • Eel, Easy Enrichment of gene List (ToppGene)
            • Gene list
            • ToppGene enrichment
            • PPI
            • Motif enrichment

            Celltype: cell type; Symbol: gene symbol; p_val: p value; avg_log2FC: average logfc between two groups; p_val_adj: adjusted p-value;

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              Toppgen enrichment analysis of genelist
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                • Category
                • ID
                • Name
                • PValue
                • QValueFDRBH
                • QValueFDRBY
                • Detail

                DataInfo&Gene
                HomoGene
                GeneSets&TF
                Stats&Anno
                TimeScaleReview
                Enrichment