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Gallus gallus
Gallus gallus provides a developmental atlas of the chicken, a key model organism for vertebrate embryology. This module supports studies on avian organ formation, gene expression during development, and comparative organogenesis across species.
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Eagle_A
Eagle_B
Eagle_C
Ant
Swan
Turtle
Eel
Raccoon
Part 1 A: Eagle, Expression Atlas at Gene LEvel
  • Information
  • GeneSet Exp
  • Cell Marker Exp
Explore data at the single-gene level
Features
Explore data at the gene set level
    • Select
    • BriefIntro
    • Remark
    • GeneNum
    • GeneList
    Gene set expression



    Image
    Part 1 B: Eagle, Expression Atlas at Gene LEvel (ShinyCell)
    • ShinyCell
    Explore data at the single-gene level
    Part 1 C: Eagle, Expression Atlas at Gene LEvel (Files of the homologous gene conversion process)
    • Homologous Gene
    • Faa
    • Gtf
    Table
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      Part 2: Ant, Association Network infered from Transcriptome
      • Explore data at the gene set level
        • Select
        • BriefIntro
        • Remark
        • GeneNum
        • GeneList
        • Association
        Putative positive regulators of
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        entries
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        • Symbol
        • Correlation
        • P value
        • Adjusted P value
        Putative negative regulators of
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        entries
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        • Symbol
        • Correlation
        • P value
        • Adjusted P value
        Part 3: Swan, Sample-Wise Statistics & ANnotation
        • Statistics
        • Clustering
        • Celltype Annotation
        • Celltype DEG
        Image
        Image
        Table
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        entries
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            Part 4: Turtle, TimeScale Unbiased Review of cellType and Lineage Expression
            • Cross species expression
            Part 5: Eel, Easy Enrichment of gene List
            • Eel, Easy Enrichment of gene List (ToppGene)
            • Gene list
            • ToppGene enrichment
            • PPI
            • Motif enrichment

            Celltype: cell type; Symbol: gene symbol; p_val: p value; avg_log2FC: average logfc between two groups; p_val_adj: adjusted p-value;

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              Toppgen enrichment analysis of genelist
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                • Category
                • ID
                • Name
                • PValue
                • QValueFDRBH
                • QValueFDRBY
                • Detail

                Part 6: Raccoon, Resource ACCOrding to atlas ONtology
                Eagle_A
                Eagle_B
                Eagle_C
                Ant
                Swan
                Turtle
                Eel
                Raccoon