Homer de novo Motif Results (/mnt/alamo01/projects/ChenLab/CNS/Data/scRNAseq/BS0000905/Motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 48
Total background sequences = 44787
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A 1e-10-2.322e+0116.67%0.47%220.9bp (262.5bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.686)
More Information | Similar Motifs Found		motif file (matrix)
2 * A T C G A G T C A G T C C G T A C G T A A C T G A C T G C G T A C A T G A T G C 1e-9-2.187e+0129.17%3.30%337.5bp (280.9bp)NFIC/MA0161.2/Jaspar(0.753)
More Information | Similar Motifs Found		motif file (matrix)
3 * G C T A G A T C G T C A G A C T G C T A G T A C G C A T C G T A A G T C A C G T 1e-8-1.894e+0137.50%7.62%278.5bp (330.4bp)ZKSCAN1/MA1585.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
4 * C G T A C G A T A C T G A G T C C G A T G A T C C G T A C T G A G A C T C T A G 1e-7-1.830e+0133.33%6.04%299.4bp (325.8bp)PH0148.1_Pou3f3/Jaspar(0.722)
More Information | Similar Motifs Found		motif file (matrix)
5 * A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T 1e-7-1.739e+0110.42%0.17%314.9bp (339.0bp)FOXB1/MA0845.1/Jaspar(0.660)
More Information | Similar Motifs Found		motif file (matrix)
6 * A C T G A G T C A C G T A C T G A G T C A G C T A C T G A G T C G C A T C T G A 1e-7-1.703e+0127.08%4.04%235.3bp (305.5bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.725)
More Information | Similar Motifs Found		motif file (matrix)
7 * A C T G A C T G A T G C A C G T C T A G A T C G A C G T A G T C A G T C A T C G 1e-6-1.551e+0114.58%0.85%136.8bp (289.2bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.767)
More Information | Similar Motifs Found		motif file (matrix)
8 * G A C T C A G T G A C T C A G T A G C T A G C T A C G T A G C T G A T C G T A C 1e-6-1.490e+0139.58%11.09%304.2bp (336.3bp)ZNF384/MA1125.1/Jaspar(0.875)
More Information | Similar Motifs Found		motif file (matrix)
9 * T C A G T A C G C T A G C A T G C T A G C G A T G C T A C T G A T G C A T C G A 1e-5-1.336e+0141.67%13.55%254.6bp (316.1bp)PB0201.1_Zfp281_2/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
10 * C G A T C A T G A T G C C G T A C G T A C G T A A C G T A T G C C G A T A G T C 1e-5-1.318e+0125.00%4.75%232.0bp (334.4bp)POU2F3/MA0627.2/Jaspar(0.748)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G T C A G C G T A A C T G C G T A A T G C A T C G T G A C A C T G A T G C 1e-5-1.305e+0120.83%3.15%239.2bp (266.4bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.647)
More Information | Similar Motifs Found		motif file (matrix)
12 * A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C 1e-4-1.086e+0120.83%4.05%243.1bp (292.7bp)NR4A1/MA1112.2/Jaspar(0.765)
More Information | Similar Motifs Found		motif file (matrix)
13 * A G T C T C G A T A G C C T G A G T A C C T G A A G T C T C G A A T G C C T G A 1e-3-8.116e+0018.75%4.58%324.9bp (314.1bp)PB0130.1_Gm397_2/Jaspar(0.761)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C T G C G T A A C G T A G T C 1e0-1.763e+0081.25%74.20%278.6bp (310.0bp)RHOXF1/MA0719.1/Jaspar(0.724)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C T G A C G T C G T A A G T C 1e0-6.539e-0162.50%61.73%285.8bp (308.0bp)PB0152.1_Nkx3-1_2/Jaspar(0.815)
More Information | Similar Motifs Found		motif file (matrix)
16 * C G T A A C G T C G T A A C G T 1e0-5.855e-0168.75%68.54%262.7bp (331.6bp)Arid5a/MA0602.1/Jaspar(0.800)
More Information | Similar Motifs Found		motif file (matrix)