p-value: | 1e-5 |
log p-value: | -1.305e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 20.83% |
Number of Background Sequences with motif | 1421.3 |
Percentage of Background Sequences with motif | 3.15% |
Average Position of motif in Targets | 693.2 +/- 239.2bp |
Average Position of motif in Background | 657.2 +/- 266.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.60 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAGACGCGC CCAGACRSVB |
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PB0160.1_Rfxdc2_2/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGAGACGCGC- CTACTTGGATACGGAAT |
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PB0203.1_Zfp691_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGAGACGCGC- NTNNNAGGAGTCTCNTN |
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PB0199.1_Zfp161_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GGAGACGCGC------- ---GCCGCGCAGTGCGT |
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PB0008.1_E2F2_1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGAGACGCGC--- ATAAAGGCGCGCGAT |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAGACGCGC CCAGACAG-- |
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ZSCAN29/MA1602.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GGAGACGCGC NCNGTGTAGACG--- |
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MAZ/MA1522.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGAGACGCGC GGGGAGGGGNN- |
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PB0009.1_E2F3_1/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGAGACGCGC--- ATAAGGGCGCGCGAT |
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HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGAGACGCGC GGGTACGTGC |
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