Information for 12-TAAAGGGCAC (Motif 12)

A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.086e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif20.83%
Number of Background Sequences with motif1827.3
Percentage of Background Sequences with motif4.05%
Average Position of motif in Targets332.8 +/- 243.1bp
Average Position of motif in Background537.7 +/- 292.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TAAAGGGCAC-
TTAAAGGTCAAA
 A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TAAAGGGCAC
NBYCAAGGTCAC
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGGCAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGGGCAC
ANGNAAAGGTCA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TAAAGGGCAC---
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TAAAGGGCAC
--AAGGTCAC
 A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAAAGGGCAC----
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TAAAGGGCAC
TCAAGGTCAN
 A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAAAGGGCAC
CAAAGGTCAG
 A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

NR2F2/MA1111.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAAAGGGCAC-
CAAAGGTCAAA
 A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C C G T A A G T C A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A