Information for 5-CTATCGACAT (Motif 5)

A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A G T C T A C G C G T A C G A T C G T A A C T G
p-value:1e-7
log p-value:-1.739e+01
Information Content per bp:1.886
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.42%
Number of Background Sequences with motif78.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets339.8 +/- 314.9bp
Average Position of motif in Background509.6 +/- 339.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTATCGACAT-
ATATTTACATA
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTATCGACAT
-TATTGAYY-
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTATCGACAT-
---TTGACAGG
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTATCGACAT
---TTGACAG
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTATCGACAT-
TGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTATCGACAT-
ATATTTACATA
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTATCGACAT---
BSNTGTTTACWYWGN
 A C G T A C G T A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTATCGACAT
TCCAATCCACA-
 A C G T A C G T A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTATCGACAT-
CNTGTTTACATA
 A C G T A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTATCGACAT
-TATGCAAAT
 A G T C A C G T C G T A A C G T A T G C C T A G C G T A A G T C C G T A A C G T
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T