Information for 1-AATCGGGGCA (Motif 1)

G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A
Reverse Opposite:
A C G T A C T G A T G C A G T C A G T C A G T C A C T G C G T A A C G T C G A T
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.871
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif210.5
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets638.0 +/- 220.9bp
Average Position of motif in Background612.7 +/- 262.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATCGGGGCA
WDNCTGGGCA
 G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AATCGGGGCA-
--TNNGGGCAG
 G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AATCGGGGCA---
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AATCGGGGCA-
NNTAATCCNGNCNN
 A C G T A C G T A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATCGGGGCA----
CGCGCCGGGTCACGTA
 A C G T A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATCGGGGCA-
WAABTAGGTCAV
 A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

RELB/MA1117.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATCGGGGCA---
--NNGGGGAATNC
 G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

RORB/MA1150.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATCGGGGCA-
AATTAGGTCAC
 G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T
C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATCGGGGCA----
AGAGCGGGGTCAAGTA
 A C G T A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

GFI1/MA0038.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATCGGGGCA
CAAATCACTGCA
 A C G T A C G T G C T A G T C A A C G T A G T C A C T G A C T G C T A G A T C G G T A C C G T A
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A