Brief introduction of ScGeneBank:
scGeneBank is an intuitive platform that combines single-cell transcriptomes from 136 species with 597 curated gene sets across 28 biological categories, enabling cross-species, organ- and cell-type specific analysis. Its eight interactive module, GeneSets, Species, EvoScreening, OrganScreening, StemAtlas, AgingScope, PathoView and DeathMap, facilitate exploration of evolutionary patterns, stemness, aging, disease and cell-death signatures with detailed gene-level annotations.
OrganScreening
OrganScreening enables cross-organ expression profiling at single-cell resolution. This module allows you to select a specific cell type and one or more functional gene sets and explore their expression patterns across human organs. The result is displayed by a bubble plot, with each row representing a geneset and each column an organ (e.g., brain, heart, liver, lung, kidney, spleen, testis, and others). Bubble size and color indicate expression levels within the selected cell type across tissues.
Investigated Organs in This Module
The datasets on this page are derived from PMID: 32214235.
    Step 1: Select a Cell Type
      Step 2: Cross-organ Atlas - Gene Set Selection
      Gene Set
      Search
        Gene sets of
        The gene sets screened for plotting
        Cross-organ Score of 0 Gene Sets in
          * For bubble plots, color represents the mean; for violin plots, color represents the median.
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