Homer de novo Motif Results (/mnt/alamo01/projects/ChenLab/CNS/Data/scRNAseq_0308/BS0002828/Motif/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 49
Total background sequences = 44526
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A T G C A C G T A G T C A C G T T G A C G T C A C A T G C G T A G C A T A G C T 1e-10-2.406e+0124.49%1.71%236.2bp (307.9bp)SIX1/MA1118.1/Jaspar(0.648)
More Information | Similar Motifs Found		motif file (matrix)
2 * C G A T G T A C A T C G A C G T A C G T A G T C A C G T G T A C A C T G A C T G 1e-8-1.933e+0114.29%0.47%282.2bp (297.4bp)PB0138.1_Irf4_2/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
3 * C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A 1e-7-1.759e+0122.45%2.43%223.4bp (301.1bp)RELB/MA1117.1/Jaspar(0.762)
More Information | Similar Motifs Found		motif file (matrix)
4 * A T G C A G T C C G T A A C T G C T G A A T G C A C T G C G T A A G T C A C G T 1e-5-1.337e+0114.29%1.15%291.9bp (383.2bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.770)
More Information | Similar Motifs Found		motif file (matrix)
5 * A G T C A C G T C G T A A C T G A C T G A C G T A G T C A C G T A C T G A G T C 1e-5-1.201e+0124.49%5.20%261.3bp (353.8bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.655)
More Information | Similar Motifs Found		motif file (matrix)
6 * A G T C A C T G C G T A A C G T A C T G A G T C A C T G A C T G A C T G A C T G 1e-5-1.201e+016.12%0.07%129.7bp (291.9bp)GCM2/MA0767.1/Jaspar(0.762)
More Information | Similar Motifs Found		motif file (matrix)
7 * A C T G A C T G A C G T A C T G A C T G C G T A C G T A A C G T A G T C C G T A 1e-3-7.534e+0016.33%3.85%227.3bp (353.8bp)PH0037.1_Hdx/Jaspar(0.722)
More Information | Similar Motifs Found		motif file (matrix)
8 * T A C G A T C G A C T G A C T G A C T G A C T G A C T G A C T G T C A G T A C G 1e-2-6.885e+0010.20%1.56%190.5bp (362.3bp)Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.906)
More Information | Similar Motifs Found		motif file (matrix)
9 * C G T A G T A C C G T A A G T C C G T A A G T C C G T A G T A C C G T A G T A C 1e-1-4.401e+0010.20%2.82%124.6bp (281.1bp)PB0130.1_Gm397_2/Jaspar(0.733)
More Information | Similar Motifs Found		motif file (matrix)
10 * C G T A A G T C A C T G A C G T 1e-1-2.680e+0071.43%60.11%274.0bp (364.7bp)HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer(0.862)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C G T A C G T A G T C A C T G 1e0-4.707e-0177.55%78.23%276.7bp (346.9bp)PB0034.1_Irf4_1/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)