Information for 3-GTCAGGGGAA (Motif 3)

C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A
Reverse Opposite:
A G C T A G C T A G T C A G T C A G T C G T A C A C G T C T A G G T C A G A T C
p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.843
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.45%
Number of Background Sequences with motif1081.6
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets593.1 +/- 223.4bp
Average Position of motif in Background540.4 +/- 301.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GTCAGGGGAA---
--NNGGGGAATNC
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

ZNF282/MA1154.1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGGGGAA--
NTCGTGTTGTGGGAAAG
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T
T A C G G A C T G T A C T A C G C A G T T A C G C G A T G C A T C T A G C A G T T A C G C T A G A T C G G C T A G C T A C G T A T A C G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTCAGGGGAA--
--CSTGGGAAAD
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTCAGGGGAA--
--CCTGGGAAAG
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGGAA-
TGTCAGGGGGCG
 A C G T C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTCAGGGGAA
TTCTNMGGAA
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCAGGGGAA-
-GGAGGGGGAA
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAGGGGAA--
TTCTNNAGAANT
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGGAA
AGGTCAAGGTCA
 A C G T A C G T C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCAGGGGAA----
TTAAGAGGAAGTTA
 C T A G A C G T A G T C T G C A C A T G A C T G A C T G A C T G C T G A C T G A A C G T A C G T A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C