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WGCNA
Weighted gene co-expression network analysis ( WGCNA ) is an analysis method suitable for complex transcriptome data. It can be used to study the development regulation of different organs or tissue types, the different development regulation of the same tissue, the response of abiotic stress at different time points, and the response at different time points after pathogen infection. Through WGCNA analysis, we can not only find out the co-expressed gene modules, but also explore the relationship between the gene network and the concerned phenotypes and the core genes in the network. In the SCAN_WGCNA module, we provide an interactive interface for WGCNA, which can help researchers better analyze complex transcriptome data.(https://github.com/ShawnWx2019/WGCNA-shinyApp)