| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer | 1e-4 | -9.255e+00 | 0.0421 | 17.0 | 34.69% | 5886.7 | 13.07% | motif file (matrix) |
svg |
| 2 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.787e+00 | 0.6746 | 30.0 | 61.22% | 18351.4 | 40.76% | motif file (matrix) |
svg |
| 3 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.610e+00 | 0.6746 | 30.0 | 61.22% | 18534.8 | 41.17% | motif file (matrix) |
svg |
| 4 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.420e+00 | 0.6746 | 19.0 | 38.78% | 9660.8 | 21.46% | motif file (matrix) |
svg |
| 5 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.705e+00 | 0.7961 | 19.0 | 38.78% | 10293.8 | 22.86% | motif file (matrix) |
svg |
