| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-3 | -7.650e+00 | 0.2095 | 21.0 | 42.86% | 9589.8 | 21.04% | motif file (matrix) |
svg |
| 2 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-2 | -6.788e+00 | 0.2479 | 20.0 | 40.82% | 9459.8 | 20.75% | motif file (matrix) |
svg |
| 3 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -6.765e+00 | 0.2479 | 15.0 | 30.61% | 5991.8 | 13.14% | motif file (matrix) |
svg |
| 4 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-2 | -5.775e+00 | 0.3415 | 37.0 | 75.51% | 25309.8 | 55.52% | motif file (matrix) |
svg |
| 5 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.330e+00 | 0.4261 | 30.0 | 61.22% | 19065.1 | 41.82% | motif file (matrix) |
svg |
| 6 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-2 | -5.244e+00 | 0.4261 | 27.0 | 55.10% | 16487.8 | 36.17% | motif file (matrix) |
svg |
| 7 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.180e+00 | 0.4261 | 22.0 | 44.90% | 12353.1 | 27.10% | motif file (matrix) |
svg |
| 8 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.107e+00 | 0.4261 | 14.0 | 28.57% | 6384.2 | 14.01% | motif file (matrix) |
svg |
| 9 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-2 | -4.851e+00 | 0.4261 | 14.0 | 28.57% | 6572.6 | 14.42% | motif file (matrix) |
svg |
