Information for 3-CAGGCTCAGC (Motif 3)

A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C
Reverse Opposite:
T C A G A G T C G A C T A C T G C G T A A C T G A T G C A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.844
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif28.00%
Number of Background Sequences with motif1677.7
Percentage of Background Sequences with motif3.76%
Average Position of motif in Targets704.3 +/- 268.5bp
Average Position of motif in Background561.4 +/- 302.3bp
Strand Bias (log2 ratio + to - strand density)-2.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFK/MA0496.3/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGGCTCAGC---
TGCTGACTCAGCAAT
 A C G T A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T A C G T
G C A T T A C G T G A C G C A T A C T G T G C A A T G C G C A T G T A C C G T A A C T G T A G C G T C A G C T A G C A T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCTCAGC---------
YCAGGCWCAGTACCAGGCTC
 A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCTCAGC
TGCTGASTCAGC
 A C G T A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

BACH1/MA1633.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTCAGC--
GATGACTCAGCAA
 A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T
A T C G T C G A A G C T A C T G T G C A T A G C C G A T G T A C C T G A A C T G T A G C G C T A G C T A

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCTCAGC
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

MAFA/MA1521.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCTCAGC--
NTGCTGACTCAGCAN
 A C G T A C G T A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T
C G A T G A C T T C A G G T A C G C A T C A T G G T C A T A G C C A G T G T A C C T G A C A T G A G T C C T G A G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGGCTCAGC---
---DCTCAGCAGG
 A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAGGCTCAGC------
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGCTCAGC-
-TGAGTCAGCA
 A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C A C G T
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGGCTCAGC
CCAGGAACAG-
 A C G T A G T C G C T A C T A G A T C G A G T C G C A T A G T C C T G A A C T G A G T C
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T