Information for 6-CTCTCTCTCT (Motif 6)

A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T
Reverse Opposite:
C G T A T A C G C G T A C T A G T G C A T C A G G C T A T A C G C G T A T A C G
p-value:1e-4
log p-value:-9.765e+00
Information Content per bp:1.822
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif29.79%
Number of Background Sequences with motif4092.3
Percentage of Background Sequences with motif9.21%
Average Position of motif in Targets668.9 +/- 276.3bp
Average Position of motif in Background523.4 +/- 343.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTCTCTCTCT-
TTCTTTCTCTT
 A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCT-
ACTTTCACTTTC
 A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTCTCTCTCT----
--VCCTCTCTGDDY
 A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCTCTCTCT---
ACCACTCTCGGTCAC
 A C G T A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCTCT---
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCTCT-
NNAATTCTCGNTNAN
 A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PKNOX1/MA0782.2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCT--
NNGCTGTCACTCANN
 A C G T A C G T A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCTCT-
MCTCCCMCRCAB
 A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

SPI1/MA0080.5/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTCTCTCT-----
NNTTTCACTTCCTCTTTTNN
 A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T A C G T A C G T A C G T A C G T A C G T
G C A T G A C T G A C T G A C T A G C T A T G C G C T A A G T C G C A T A G C T G A T C G A T C G A C T A G T C G C A T G A C T G A C T G A C T G A C T G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT
GCTCGGSCTC-
 A C G T A T G C G C A T A T G C C G A T A G T C A C G T A G T C G C A T A T G C G C A T
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T