Information for 5-RGCCTCAGCG (Motif 5)

C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C T G C G T A A C T G A T C G A G T C G A C T
p-value:1e-5
log p-value:-1.267e+01
Information Content per bp:1.823
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif27.66%
Number of Background Sequences with motif2704.1
Percentage of Background Sequences with motif6.08%
Average Position of motif in Targets637.4 +/- 262.7bp
Average Position of motif in Background610.3 +/- 306.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--RGCCTCAGCG--
NNCGCCTCAGGCNN
 A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--RGCCTCAGCG--
ATTGCCTCAGGCCA
 A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

BACH1/MA1633.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--RGCCTCAGCG-
GATGACTCAGCAA
 A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T
A T C G T C G A A G C T A C T G T G C A T A G C C G A T G T A C C T G A A C T G T A G C G C T A G C T A

MAFK/MA0496.3/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---RGCCTCAGCG--
TGCTGACTCAGCAAT
 A C G T A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T A C G T
G C A T T A C G T G A C G C A T A C T G T G C A A T G C G C A T G T A C C G T A A C T G T A G C G T C A G C T A G C A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTCAGCG-
ATGACTCAGCAD
 A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----RGCCTCAGCG-
AGGATGACTCAGCAC
 A C G T A C G T A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-RGCCTCAGCG----
ATGACTCAGCANWWT
 A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T A C G T A C G T A C G T
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--RGCCTCAGCG
GATGACTCAGCA
 A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G
T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:RGCCTCAGCG
TGAGTCAGCA
 C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

NFE2L1/MA0089.2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----RGCCTCAGCG--
AGAATGACTCAGCAAT
 A C G T A C G T A C G T A C G T C T G A A C T G A T G C A G T C A C G T A G T C T G C A A C T G A G T C T C A G A C G T A C G T
G C T A T A C G G T C A T C G A G C A T C A T G C T G A A T G C C G A T G T A C C G T A C A T G A T G C C G T A C G T A C G A T