Information for 4-TAMTATATAC (Motif 4)

A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
Reverse Opposite:
C T A G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T C G T A
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif14.89%
Number of Background Sequences with motif472.2
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets383.4 +/- 330.3bp
Average Position of motif in Background467.1 +/- 352.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TAMTATATAC---
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAMTATATAC----
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAMTATATAC--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TAMTATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TAMTATATAC
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

CUX1/MA0754.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAMTATATAC
TAATCGATAA
 A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAMTATATAC
TTATTAGTACATAN
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAMTATATAC
TAATCGATAA
 A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAMTATATAC
AATATTAATAAAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAMTATATAC---
--ATATTTACATA
 A C G T C G T A G T A C A C G T C G T A C G A T C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A