Information for 3-GTAC (Motif 9)

A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C
p-value:1e0
log p-value:-1.837e+00
Information Content per bp:1.530
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif71.79%
Number of Background Sequences with motif26875.0
Percentage of Background Sequences with motif62.79%
Average Position of motif in Targets499.1 +/- 297.0bp
Average Position of motif in Background516.0 +/- 313.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------GTAC-------
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.75
Offset:-8
Orientation:forward strand
Alignment:--------GTAC-----
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

ZBTB32/MA1580.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTAC-----
TGTACAGTAT
 A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GTAC------
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTAC--------
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GTAC-------
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTAC------
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTAC----
TTATTAGTACATAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTAC--
CCAGGAACAG
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Gmeb1/MA0615.1/Jaspar

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------GTAC-----
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G