Information for 5-TGCCCAGGCA (Motif 5)

C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
Reverse Opposite:
A C G T A C T G A T G C A G T C A C G T A C T G A C T G A C T G A T G C C G T A
p-value:1e-4
log p-value:-1.013e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif699.4
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets500.9 +/- 317.0bp
Average Position of motif in Background558.3 +/- 274.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGGCA
TGCCCAGNHW
 C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGGCA-
ACATGCCCGGGCAT
 A C G T A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGGCA
ATGCCCACC--
 A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGGCA
ACGCCCACGCA
 A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

EGR4/MA0733.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGGCA---
TTACGCCCACGCATTT
 A C G T A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

EGR3/MA0732.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCAGGCA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NFIC/MA0161.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCAGGCA
NNTGCCAAGNN-
 A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCAGGCA
NNTTCCCANN--
 A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCCCAGGCA-----
CAAATCCAGACATCACA
 A C G T A C G T C G A T A T C G A G T C A G T C A G T C C G T A A C T G A T C G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A