Information for 2-GCWAAGAGGG (Motif 2)

A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C A G C T A C G T C G T A A T C G A G T C
p-value:1e-5
log p-value:-1.253e+01
Information Content per bp:1.900
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif20.51%
Number of Background Sequences with motif1028.3
Percentage of Background Sequences with motif2.40%
Average Position of motif in Targets717.1 +/- 280.0bp
Average Position of motif in Background576.5 +/- 310.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCWAAGAGGG--
--HAWGRGGCCM
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

MAZ/MA1522.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCWAAGAGGG---
--GGGGAGGGGNN
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCWAAGAGGG----
--CAAGATGGCGGC
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCWAAGAGGG
-TTAAGTGGT
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCWAAGAGGG------
TGCGCATAGGGGAGGAG
 A C G T A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCWAAGAGGG----
----GGAGGGGGAA
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCWAAGAGGG----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

ZNF148/MA1653.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCWAAGAGGG---
-GGGGGAGGGGNG
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCWAAGAGGG-------
NNNAAGGGGGCGGGNNN
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCWAAGAGGG--
--TATGCGGGTA
 A C T G A T G C C G A T C G T A C T G A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A