Information for 6-CACACTAGGG (Motif 6)

T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G
Reverse Opposite:
A T G C G T A C A G T C A G C T T C G A C A T G A C G T T A C G A C G T A C T G
p-value:1e-4
log p-value:-1.022e+01
Information Content per bp:1.585
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif22.00%
Number of Background Sequences with motif2298.7
Percentage of Background Sequences with motif5.11%
Average Position of motif in Targets518.7 +/- 243.3bp
Average Position of motif in Background516.0 +/- 314.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF3/MA1637.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACACTAGGG--
NNTCCCTTGGGAN
 A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACACTAGGG--
CTCACAGCAGGGGG
 A C G T A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACACTAGGG--
CACAGCAGGGGG
 T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACACTAGGG---
NABTCCCWDGGGAVH
 A C G T A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T A C G T
C G T A C T G A A C T G A G C T A G T C G A T C G A T C G C A T C T G A C T A G C T A G T A C G T C G A T G C A G C A T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACACTAGGG-
NGTCCCNNGGGA
 A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A

Ebf2/MA1604.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACACTAGGG--
NNTCCCTTGGGAN
 A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACACTAGGG---
CCCCCCCGGGGGNN
 A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACACTAGGG--
CHCAGCRGGRGG
 T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACACTAGGG----
CACAGCGGGGGGTC
 T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACACTAGGG----
ACCCCCCCGGGGGGN
 A C G T T G A C T G C A A T G C T G C A G T A C A G C T T C G A T C A G C A T G T A C G A C G T A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G