Information for 4-CTATAATATA (Motif 4)

A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A
Reverse Opposite:
A C G T G T C A C G A T C G T A A C G T A C G T C G T A A C G T C G T A A C T G
p-value:1e-5
log p-value:-1.300e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif12.00%
Number of Background Sequences with motif338.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets505.1 +/- 328.4bp
Average Position of motif in Background424.8 +/- 256.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTATAATATA-
AACCAATAAAATTT
 A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTATAATATA-
TATAATTATAATATTC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CTATAATATA-
TTTAATTATAATTAAG
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTATAATATA-
TAAGATTATAATACGG
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTATAATATA--
CTACCAATAAAATTCT
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTATAATATA-
GCTAATTATAATTATC
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTATAATATA
-AATAATT--
 A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTATAATATA-----
CCATAATTAATTACA
 A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTATAATATA-
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTATAATATA-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A G T C C G A T C G T A C G A T C G T A C G T A A C G T C G T A C A G T C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A