Information for 5-TCCTTTAATA (Motif 5)

A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A
Reverse Opposite:
A C G T C G T A A C G T C G A T C G T A C G T A G T C A A C T G A C T G G T C A
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.844
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.37%
Number of Background Sequences with motif638.1
Percentage of Background Sequences with motif1.40%
Average Position of motif in Targets554.7 +/- 313.0bp
Average Position of motif in Background498.4 +/- 304.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCCTTTAATA
---TTTAAT-
 A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCCTTTAATA---
-CCTTTTATAGNC
 A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTTAATA----
NNTTCCTTTGATCTNNA
 A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCTTTAATA----
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCTTTAATA----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCCTTTAATA----
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCTTTAATA-
-CCTTTGATST
 A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCTTTAATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCTTTAATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TCF7/MA0769.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCCTTTAATA-
TCCTTTGATGT
 A C G T G T A C A G T C C A G T A C G T C G A T C G T A G T C A C G A T T G C A A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T