Information for 3-TTTGCTCGCT (Motif 3)

A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T
Reverse Opposite:
C T G A A C T G A T G C T A C G C G T A A C T G A G T C C T G A C G T A C T G A
p-value:1e-7
log p-value:-1.780e+01
Information Content per bp:1.877
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.37%
Number of Background Sequences with motif610.9
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets630.1 +/- 264.4bp
Average Position of motif in Background540.8 +/- 291.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCTCGCT
NATTGTTCGGT
 A C G T A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TTTGCTCGCT
--NGCTN---
 A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTTGCTCGCT----
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTTGCTCGCT--
--TGCTGACTCA
 A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T A C G T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTGCTCGCT-----
NTCGCGCGCCTTNNN
 A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTTGCTCGCT-
TAAAAATGCTGACTT
 A C G T A C G T A C G T A C G T A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTGCTCGCT
---GCTCCG-
 A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTGCTCGCT--
TTTTCGCGCGAA
 A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T A C G T
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTCGCT-
VDTTTCCCGCCA
 A C G T A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

PRDM1/MA0508.3/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTTGCTCGCT
TTCTTTCTCTT-
 A C G T A C G T A G C T A C G T A G C T A C T G A G T C A C G T A T G C A T C G A G T C A G C T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T