Information for 2-GGTAACCGAC (Motif 2)

C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C
Reverse Opposite:
A C T G A C G T A G T C A C T G A C T G A G C T C G A T C G T A A G T C A G T C
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.881
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif10.20%
Number of Background Sequences with motif57.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets491.0 +/- 301.7bp
Average Position of motif in Background561.5 +/- 247.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGTAACCGAC
--YAACBGCC
 C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTAACCGAC---
NNTTTANNCGACGNA
 A C G T A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGTAACCGAC---
AAGGTCANTGACCTT
 A C G T A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTAACCGAC-
---AACCGANA
 C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTAACCGAC---
AAGGTCANTGACCTT
 A C G T A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C T C G A T A C G G A C T T C A G T G C A G T A C G T A C A G C T G A C T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTAACCGAC-
-NHAACBGYYV
 C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTAACCGAC-
AGGTGHCAGACA
 A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTAACCGAC---
GGGGTCAATGACCTN
 A C G T A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

IRF3/MA1418.1/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GGTAACCGAC----
GGGAAACGGAAACCGAAACTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C A C G T A C G T A C G T A C G T
T A C G T A C G C T A G C T G A C T G A G C T A G T A C A T C G C T A G T C G A C T G A C G T A A T G C A T G C C T A G T G C A G C T A G C T A T A G C A G C T C T A G

FOXN3/MA1489.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGTAACCGAC
-GTAAACAA-
 C T A G A C T G A C G T C G T A T C G A A G T C A G T C A C T G C G T A G T A C
A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T