Information for 4-CTAG (Motif 13)

A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G
p-value:1e0
log p-value:-2.780e-01
Information Content per bp:1.530
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif77.55%
Number of Background Sequences with motif36630.5
Percentage of Background Sequences with motif80.38%
Average Position of motif in Targets584.5 +/- 261.1bp
Average Position of motif in Background525.1 +/- 299.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.97
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTAG-
TGTCTAGA
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.72
Offset:-7
Orientation:reverse strand
Alignment:-------CTAG----
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTAG---
CGTCTAGACA
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.69
Offset:-8
Orientation:forward strand
Alignment:--------CTAG-----
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTAG---
TGTCTAGACA
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTAG--------
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTAG-
GTTAACTAGN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTAG-----
ATCTGGAACCC
 A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTAG---------
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTAG
AGGCCTAG
 A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G