Information for 1-TTCG (Motif 10)

A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A
p-value:1e0
log p-value:-7.597e-01
Information Content per bp:1.530
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif77.55%
Number of Background Sequences with motif34570.1
Percentage of Background Sequences with motif75.86%
Average Position of motif in Targets564.5 +/- 268.6bp
Average Position of motif in Background567.6 +/- 299.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)3.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------TTCG-----
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTCG------
NTGGTTTCGGTTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF6/MA1509.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTCG--
AGTTTCGGT
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTCG
GCTTCC
 A C G T A C G T A C G T A C G T A G T C A C T G
A C T G A T G C A G C T A C G T A T G C A T G C

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.69
Offset:-8
Orientation:reverse strand
Alignment:--------TTCG-----
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

SOX12/MA1561.1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TTCG--
NATTGTTCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTCG------
TNAGTTTCGATTTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTCG--
TGGTTTCAGT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

SOX14/MA1562.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTCG-
CATTGTTCGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

PB0033.1_Irf3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTCG------
CAGTTTCGNTTCTN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C