Information for 5-GTAGTTGGTC (Motif 5)

A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C C G T A C G T A A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.150e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets731.0 +/- 0.0bp
Average Position of motif in Background382.5 +/- 354.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTTGGTC-
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTTGGTC-
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAGTTGGTC-
CGTGGGTGGTCC
 A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLI2/MA0734.2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTTGGTC-
CGNCGTGGGTGGTCN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

GLI3/MA1491.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTTGGTC-
CGNCGTGGGTGGTCN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T

PH0107.1_Msx2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTTGGTC---
ANCGCTAATTGGTCTNN
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTAGTTGGTC
ATAGTAGGTG
 A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

LHX2/MA0700.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTTGGTC
NNTAATTGGNN
 A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTAGTTGGTC-
YSTGGGTGGTCT
 A C G T A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

ZNF449/MA1656.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAGTTGGTC----
NNGGTTGGGCTTNN
 A C T G A C G T C G T A A C T G A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G