Information for 2-TGTTAGATAC (Motif 2)

A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A G T C A C G T C G T A C G T A A G T C C G T A
p-value:1e-3
log p-value:-9.131e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets276.0 +/- 0.0bp
Average Position of motif in Background379.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTTAGATAC--
GGTTAGAGACCT
 A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTTAGATAC-----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGTTAGATAC---
--NTTGATACATT
 A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTTAGATAC---
TACCCTAGTTACCGA
 A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TGTTAGATAC-------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGATAC--
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTTAGATAC--
----AGATAASR
 A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAGATAC
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGTTAGATAC----
----AGATAAGANN
 A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

SOX12/MA1561.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGTTAGATAC
NATTGTTCGGT--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G C G T A A C G T C G T A A G T C
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T