Information for 19-CTGAACATAT (Motif 18)

A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C T G A C G T A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.052e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background260.3 +/- 297.5bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OLIG1/MA0826.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---AACATATGTT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---AACATATGTT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTGAACATAT----
--AAACATATGTTT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG3/MA0827.1/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---ACCATATGTT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---ACCATATGGT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---AACATATGTC
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTGAACATAT---
---NACATATGGN
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---ACCATATGTT
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

NEUROG1/MA0623.2/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTGAACATAT---
---GACATATGTC
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C

ATOH7/MA1468.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTGAACATAT---
---AACATATGTC
 A G T C A C G T A C T G C G T A C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C