Information for 2-TTGAAGCTTT (Motif 2)

A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A T A C G A G T C G A C T A C G T A G T C C T G A C G T A
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.846
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif21.28%
Number of Background Sequences with motif865.0
Percentage of Background Sequences with motif1.94%
Average Position of motif in Targets388.9 +/- 127.2bp
Average Position of motif in Background444.3 +/- 301.0bp
Strand Bias (log2 ratio + to - strand density)-2.5
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:TTGAAGCTTT
---AAGCTTG
 A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTGAAGCTTT
-NGAAGC---
 A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAGCTTT
TTTGAAACCG-
 A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAGCTTT---
CCTTGCAATTTTTNN
 A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTGAAGCTTT
NNTTGAGGTTNN
 A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTGAAGCTTT-------
TTCTAGAANNTTCCAGAANN
 A C G T A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TTGAAGCTTT
TTCTAGAACGTTC
 A C G T A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAAGCTTT
TNCCTTTGATCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TTGAAGCTTT
----NGCTN-
 A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTGAAGCTTT--
TTCTAGAABNTTCTA
 A C G T A C G T A C G T A C G T G A C T A C T G G T C A C T G A A C T G A T G C C G A T A G C T A C G T A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A