| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer | 1e-4 | -9.631e+00 | 0.0289 | 16.0 | 32.00% | 4974.0 | 11.12% | motif file (matrix) |
svg |
| 2 |
| DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer | 1e-2 | -6.396e+00 | 0.3669 | 24.0 | 48.00% | 12326.9 | 27.57% | motif file (matrix) |
svg |
| 3 |
| PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.989e+00 | 0.3676 | 6.0 | 12.00% | 1234.4 | 2.76% | motif file (matrix) |
svg |
| 4 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -5.442e+00 | 0.4765 | 20.0 | 40.00% | 10098.6 | 22.58% | motif file (matrix) |
svg |
| 5 |
| DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer | 1e-2 | -5.076e+00 | 0.5497 | 32.0 | 64.00% | 20299.0 | 45.40% | motif file (matrix) |
svg |
| 6 |
| Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -4.849e+00 | 0.5749 | 32.0 | 64.00% | 20555.0 | 45.97% | motif file (matrix) |
svg |
| 7 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-2 | -4.800e+00 | 0.5749 | 25.0 | 50.00% | 14607.4 | 32.67% | motif file (matrix) |
svg |
| 8 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.695e+00 | 0.5749 | 29.0 | 58.00% | 18085.5 | 40.45% | motif file (matrix) |
svg |
| 9 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.636e+00 | 0.5749 | 13.0 | 26.00% | 5790.2 | 12.95% | motif file (matrix) |
svg |
