Information for 9-CGCCGGGGTT (Motif 9)

A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T
Reverse Opposite:
C G T A C T G A A G T C A G T C A G T C A G T C A C T G C T A G G T A C A C T G
p-value:1e-5
log p-value:-1.194e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets515.2 +/- 219.7bp
Average Position of motif in Background667.5 +/- 268.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGCCGGGGTT-
CTTCGCGGGGGGTC
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGGGGTT-
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGGGGTT-
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGGGGTT-
YCCDNTCCAGGTTTT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
A G T C G A T C A G T C C G T A A T C G C A G T A G T C G T A C C T G A A C T G T C A G A G C T A G C T A G C T A G C T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCCGGGGTT-
CCCCCCCGGGGGNN
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

Prdm15/MA1616.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGGGGTT----
NNTCCAGGTTTTCCN
 A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T
C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

GLIS1/MA0735.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGGGGTT--
GCTTCGTGGGGGGTCT
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCGGGGTT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGGGGTT--
NNAGGGGCGGGGTNNA
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGCCGGGGTT-
NCGCAGCGGGGGGTC
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C T G A C T G A C T G A C T G A G C T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C