Information for 4-GTCATATATA (Motif 4)

A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G C T G A A G T C
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.881
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif24.00%
Number of Background Sequences with motif1390.2
Percentage of Background Sequences with motif3.11%
Average Position of motif in Targets545.6 +/- 298.3bp
Average Position of motif in Background463.1 +/- 335.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTCATATATA----
NANTTATATATAANGN
 A C G T A C G T A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCATATATA--
GCTAAAAATAGC
 A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCATATATA-
-CCATATATGG
 A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTCATATATA--
KCCAAAAATAGC
 A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCATATATA-----
ATGGGATATATCCGCCT
 A C G T A C G T A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTCATATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTCATATATA-
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCATATATA--
DCYAAAAATAGM
 A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCATATATA
GTCATAAAAN
 A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCATATATA---
ATGCTAAAAATAGAA
 A C G T A C G T A C T G G A C T A G T C C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A