Information for 13-GCTGCTGCTG (Motif 11)

A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
Reverse Opposite:
G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C T G G T A C
p-value:1e-3
log p-value:-8.695e+00
Information Content per bp:1.870
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif26.00%
Number of Background Sequences with motif3709.4
Percentage of Background Sequences with motif8.30%
Average Position of motif in Targets737.4 +/- 194.9bp
Average Position of motif in Background549.4 +/- 315.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTG-
AGCAGCTGCTNN
A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCTGCTGCTG
-CAGCTGNT-
A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTGCTG
AGCAGCTGCT-
A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCTGCTGCTG
NNCCTGCTGNG-
A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCTGCTGCTG
CAGCAGCTGCTG
A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGCTGCTG--
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCTGCTGCTG
NCAGCTGCTG
A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTGCTG-
DGCAGCTGCYSS
A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTGCTGCTG
CGCAGCTGCG-
A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCTGCTG----
AGATGCTRCTRCCHT
A C G T A C T G A G T C A C G T A C T G A G T C C G A T A C T G G T A C C G A T A C T G A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T