Information for 12-AGCTGATTGC (Motif 10)

C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C G T A G T C C G T A A C T G A G T C A C G T
p-value:1e-4
log p-value:-9.456e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif18.00%
Number of Background Sequences with motif1640.1
Percentage of Background Sequences with motif3.67%
Average Position of motif in Targets454.6 +/- 298.2bp
Average Position of motif in Background529.7 +/- 354.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:AGCTGATTGC
--TTGATTGN
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCTGATTGC--
-NCTGATTGGNN
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

TFAP4/MA0691.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGCTGATTGC
AACAGCTGAT---
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C
T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCTGATTGC--
-NCTGATTGGNN
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGATTGC-----
TNNNATGATTTCNNCNN
 A C G T A C G T C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGATTGC
HCAGCTGDTN--
 A C G T A C G T C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCTGATTGC-
-GNTAATTGGN
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCTGATTGC-
-GTTAATGGCC
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

LHX1/MA1518.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCTGATTGC
--NTAATTGN
 C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C
A C G T A C G T A T C G G C A T T C G A C G T A C G A T A C G T C T A G T A G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCTGATTGC-
CAGCTGTTTCCT
 A C G T C G T A A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C T G A G T C A C G T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T