Motif Name Consensus P-value Log P-value q-value (Benjamini) # of Target Sequences with Motif(of 49) % of Target Sequences with Motif # of Background Sequences with Motif(of 44045) % of Background Sequences with Motif ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer SMCAGTCWGAKGGAGGAGGC 1e-3 -7.626e+00 0.2146 8.0 16.33% 1673.7 3.80% Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer DCYAAAAATAGM 1e-2 -5.032e+00 1.0000 11.0 22.45% 4285.5 9.72% Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer NNNVCTGWGYAAACASN 1e-1 -4.304e+00 1.0000 18.0 36.73% 9699.2 22.00% OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer ATGCATWATGCATRW 1e-1 -4.181e+00 1.0000 13.0 26.53% 6177.9 14.01% NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WNTGTTTRYTTTGGCA 1e-1 -4.174e+00 1.0000 3.0 6.12% 467.3 1.06% PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer ADGGYAGYAGCATCT 1e-1 -3.655e+00 1.0000 11.0 22.45% 5215.2 11.83% Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer CTGTCTGG 1e-1 -3.573e+00 1.0000 30.0 61.22% 20541.8 46.59% NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer ACCATCTGTT 1e-1 -3.550e+00 1.0000 26.0 53.06% 17052.0 38.67% Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer YTGWCADY 1e-1 -3.520e+00 1.0000 36.0 73.47% 26206.8 59.44% CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer ATTGCGCAAC 1e-1 -3.519e+00 1.0000 13.0 26.53% 6740.7 15.29% CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer TATCGATNAN 1e-1 -3.508e+00 1.0000 12.0 24.49% 6035.8 13.69% TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer SMCATCTGKH 1e-1 -3.280e+00 1.0000 26.0 53.06% 17418.0 39.50% TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer CYRCATTCCA 1e-1 -3.254e+00 1.0000 19.0 38.78% 11614.1 26.34% ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer ARGAGGMCAAAATGW 1e-1 -3.241e+00 1.0000 5.0 10.20% 1689.3 3.83% Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer RSCACTYRAG 1e-1 -3.066e+00 1.0000 37.0 75.51% 27830.6 63.12% MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer WNTGCTGASTCAGCANWTTY 1e-1 -3.010e+00 1.0000 8.0 16.33% 3687.9 8.36% BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer NHAACBGYYV 1e-1 -3.001e+00 1.0000 26.0 53.06% 17817.1 40.41% NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer GCCATCTGTT 1e-1 -2.990e+00 1.0000 17.0 34.69% 10346.1 23.46% Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer CYAAAAATAG 1e-1 -2.953e+00 1.0000 9.0 18.37% 4412.5 10.01% Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer TTRAGTGSYK 1e-1 -2.933e+00 1.0000 30.0 61.22% 21468.1 48.69% TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer TRCATTCCAG 1e-1 -2.899e+00 1.0000 20.0 40.82% 12887.4 29.23% Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer NNVVCAGCTGBN 1e-1 -2.895e+00 1.0000 30.0 61.22% 21527.3 48.82% TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer CCWGGAATGY 1e-1 -2.856e+00 1.0000 17.0 34.69% 10514.5 23.85% Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer TGCTGAGTCA 1e-1 -2.827e+00 1.0000 5.0 10.20% 1899.9 4.31% Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGCATAATTCA 1e-1 -2.760e+00 1.0000 7.0 14.29% 3209.1 7.28% Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer HAWGRGGCCM 1e-1 -2.748e+00 1.0000 42.0 85.71% 33345.2 75.62% Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer TGTCANYT 1e-1 -2.744e+00 1.0000 37.0 75.51% 28323.1 64.23% ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer VCAGGTRDRY 1e-1 -2.741e+00 1.0000 31.0 63.27% 22681.0 51.44% RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer AAACCACARM 1e-1 -2.715e+00 1.0000 17.0 34.69% 10698.1 24.26% Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer GCTATTTTTGGM 1e-1 -2.704e+00 1.0000 14.0 28.57% 8347.1 18.93% BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer NAMCAGCTGK 1e-1 -2.678e+00 1.0000 24.0 48.98% 16576.5 37.59% Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer RCCATMTGTT 1e-1 -2.586e+00 1.0000 27.0 55.10% 19339.1 43.86% Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer AAACMATTAN 1e-1 -2.584e+00 1.0000 9.0 18.37% 4743.0 10.76% DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer TWGHWACAWTGTWDC 1e-1 -2.555e+00 1.0000 5.0 10.20% 2058.4 4.67% EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer DGTCCCYRGGGA 1e-1 -2.489e+00 1.0000 9.0 18.37% 4834.8 10.97% bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer NAGTTTCABTHTGACTNW 1e-1 -2.473e+00 1.0000 8.0 16.33% 4133.6 9.37% Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer HDGYAATGAAAN 1e-1 -2.457e+00 1.0000 23.0 46.94% 16069.6 36.44% Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATATTC 1e-1 -2.454e+00 1.0000 3.0 6.12% 935.9 2.12% ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer VAGGTCACNSTGACC 1e-1 -2.452e+00 1.0000 7.0 14.29% 3453.5 7.83% CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer AYAGTGCCMYCTRGTGGCCA 1e-1 -2.341e+00 1.0000 6.0 12.24% 2860.9 6.49% Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer RGKGGGCGGAGC 1e0 -2.287e+00 1.0000 35.0 71.43% 27170.7 61.62% PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GCAGCCAAGCRTGACH 1e0 -2.280e+00 1.0000 10.0 20.41% 5794.5 13.14% GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer RGGATTAR 1e0 -2.267e+00 1.0000 17.0 34.69% 11338.6 25.72% DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer YDGHTACAWTGTADC 1e0 -2.265e+00 1.0000 4.0 8.16% 1611.3 3.65% E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer NVCACCTGBN 1e0 -2.261e+00 1.0000 28.0 57.14% 20787.1 47.14% Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer ATATGCAAAT 1e0 -2.212e+00 1.0000 6.0 12.24% 2965.6 6.73% MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer GCTGASTCAGCA 1e0 -2.196e+00 1.0000 5.0 10.20% 2300.6 5.22% Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer VBSYGTCTGG 1e0 -2.139e+00 1.0000 28.0 57.14% 21011.3 47.65% Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAW 1e0 -2.131e+00 1.0000 8.0 16.33% 4469.6 10.14% HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer TWVGGTCCGC 1e0 -2.126e+00 1.0000 16.0 32.65% 10735.1 24.35% CHR(?)/Hela-CellCycle-Expression/Homer SRGTTTCAAA 1e0 -2.087e+00 1.0000 11.0 22.45% 6795.2 15.41% PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer NGTGTTCAVTSAAGCGKAAA 1e0 -2.083e+00 1.0000 3.0 6.12% 1104.8 2.51% EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer NWGGGTGTGGCY 1e0 -2.073e+00 1.0000 7.0 14.29% 3799.6 8.62% TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer CCWGGAATGY 1e0 -2.048e+00 1.0000 10.0 20.41% 6072.6 13.77% SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer GCAACAGGTG 1e0 -2.020e+00 1.0000 7.0 14.29% 3852.5 8.74% KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer DGGGYGKGGC 1e0 -2.018e+00 1.0000 36.0 73.47% 28610.4 64.89% En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer NDCTAATTAS 1e0 -2.013e+00 1.0000 25.0 51.02% 18588.3 42.16% KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer NRGCCCCRCCCHBNN 1e0 -2.013e+00 1.0000 22.0 44.90% 15977.2 36.24% DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer NSNNTAATTA 1e0 -2.011e+00 1.0000 19.0 38.78% 13423.9 30.44% GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer CTCCCTGGGAGGCCN 1e0 -1.981e+00 1.0000 33.0 67.35% 25870.4 58.67% Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer CCCCTCCCCCAC 1e0 -1.945e+00 1.0000 11.0 22.45% 6986.3 15.84% Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer CYTGTTTACWYW 1e0 -1.945e+00 1.0000 12.0 24.49% 7778.7 17.64% ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer MACCTTCYATGGCTCCCTAKTGCCY 1e0 -1.923e+00 1.0000 1.0 2.04% 141.3 0.32% Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer TBGCACGCAA 1e0 -1.865e+00 1.0000 16.0 32.65% 11164.1 25.32% PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer ACCRTGACTAATTNN 1e0 -1.859e+00 1.0000 4.0 8.16% 1880.2 4.26% Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer GKTAATGR 1e0 -1.837e+00 1.0000 28.0 57.14% 21604.2 49.00% DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer NNNTAATTAS 1e0 -1.820e+00 1.0000 20.0 40.82% 14622.2 33.16% Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer CTGGCAGSCTGCCA 1e0 -1.797e+00 1.0000 9.0 18.37% 5622.8 12.75% Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer MCAGCTGBYH 1e0 -1.782e+00 1.0000 26.0 53.06% 19932.5 45.21% Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer GATTTGCATA 1e0 -1.777e+00 1.0000 6.0 12.24% 3370.1 7.64% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -1.764e+00 1.0000 3.0 6.12% 1284.3 2.91% RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer AAYTAGGTCA 1e0 -1.764e+00 1.0000 3.0 6.12% 1284.3 2.91% Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer HNRAATCAAT 1e0 -1.757e+00 1.0000 7.0 14.29% 4139.0 9.39% PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer MGGAAGTGAAAC 1e0 -1.752e+00 1.0000 23.0 46.94% 17353.3 39.36% Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer CTGTTTAC 1e0 -1.749e+00 1.0000 25.0 51.02% 19116.5 43.35% ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer AACATCTGGA 1e0 -1.749e+00 1.0000 10.0 20.41% 6474.8 14.68% Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer GCTATTTTTAGC 1e0 -1.747e+00 1.0000 4.0 8.16% 1966.6 4.46% THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer GGTCANYTGAGGWCA 1e0 -1.719e+00 1.0000 10.0 20.41% 6517.7 14.78% Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer ATGMATATDC 1e0 -1.711e+00 1.0000 13.0 26.53% 8952.5 20.30% REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer GGMGCTGTCCATGGTGCTGA 1e0 -1.701e+00 1.0000 1.0 2.04% 180.9 0.41% KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer RGKGGGCGKGGC 1e0 -1.689e+00 1.0000 40.0 81.63% 33081.6 75.03% STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer RTTTCTNAGAAA 1e0 -1.684e+00 1.0000 7.0 14.29% 4224.8 9.58% ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer GAGSCCGAGC 1e0 -1.681e+00 1.0000 9.0 18.37% 5782.0 13.11% MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer AACAGCTG 1e0 -1.680e+00 1.0000 20.0 40.82% 14900.2 33.79% Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer TYTGACCASWRG 1e0 -1.670e+00 1.0000 12.0 24.49% 8204.1 18.61% Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCHGATTAC 1e0 -1.657e+00 1.0000 1.0 2.04% 189.6 0.43% Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer TGACANARRCCAGRC 1e0 -1.649e+00 1.0000 9.0 18.37% 5825.6 13.21% ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer WDNCTGGGCA 1e0 -1.648e+00 1.0000 24.0 48.98% 18449.1 41.84% RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer GCTGTGGTTW 1e0 -1.647e+00 1.0000 11.0 22.45% 7428.8 16.85% ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer TGGGGAAGGGCM 1e0 -1.636e+00 1.0000 25.0 51.02% 19358.4 43.90% Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer NAACAGCTGG 1e0 -1.634e+00 1.0000 18.0 36.73% 13280.1 30.12% E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer GGCGGGAARN 1e0 -1.627e+00 1.0000 21.0 42.86% 15874.3 36.00% Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer NTAATBNAATTA 1e0 -1.622e+00 1.0000 9.0 18.37% 5865.8 13.30% Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer TWGTCTGV 1e0 -1.601e+00 1.0000 35.0 71.43% 28512.2 64.66% Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer AGGVNCCTTTGT 1e0 -1.590e+00 1.0000 13.0 26.53% 9162.2 20.78% RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer AAWCTAGGTCARDNN 1e0 -1.581e+00 1.0000 3.0 6.12% 1407.5 3.19% Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer ACAGCTGTTN 1e0 -1.559e+00 1.0000 36.0 73.47% 29540.4 67.00% Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer GGATGACTCATC 1e0 -1.556e+00 1.0000 7.0 14.29% 4385.6 9.95% NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer VTTACGTAAYNNNNN 1e0 -1.553e+00 1.0000 10.0 20.41% 6771.7 15.36% HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer GTTAATNATTAA 1e0 -1.537e+00 1.0000 3.0 6.12% 1439.7 3.27% Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer RGCAATNAAA 1e0 -1.533e+00 1.0000 30.0 61.22% 24071.4 54.59% Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer TRCACCTGCY 1e0 -1.527e+00 1.0000 18.0 36.73% 13498.4 30.61% Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer GGTTAAWCATTAA 1e0 -1.526e+00 1.0000 3.0 6.12% 1447.1 3.28% Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer TGCGTGGGYG 1e0 -1.524e+00 1.0000 23.0 46.94% 17844.3 40.47% GFY-Staf(?,Zf)/Promoter/Homer RACTACAATTCCCAGAAKGC 1e0 -1.502e+00 1.0000 4.0 8.16% 2178.5 4.94% TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer ACWTCAAAGG 1e0 -1.500e+00 1.0000 2.0 4.08% 799.2 1.81% Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer AAGCACTTAA 1e0 -1.480e+00 1.0000 28.0 57.14% 22391.9 50.78% Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer NYTAATCCYB 1e0 -1.475e+00 1.0000 12.0 24.49% 8541.1 19.37% HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer VCAGCTGBNN 1e0 -1.470e+00 1.0000 31.0 63.27% 25127.9 56.99% Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer TAATCAATTA 1e0 -1.467e+00 1.0000 2.0 4.08% 817.6 1.85% Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer TATGCWAATBAV 1e0 -1.460e+00 1.0000 5.0 10.20% 2966.4 6.73% Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer RRSCACTYAA 1e0 -1.458e+00 1.0000 29.0 59.18% 23344.5 52.94% Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer GATGASTCATCN 1e0 -1.457e+00 1.0000 4.0 8.16% 2221.8 5.04% HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer GCACGTACCC 1e0 -1.440e+00 1.0000 9.0 18.37% 6142.5 13.93% Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer HTTTCCCASG 1e0 -1.438e+00 1.0000 25.0 51.02% 19811.8 44.93% FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer TGTTTAYTTAGC 1e0 -1.437e+00 1.0000 11.0 22.45% 7782.5 17.65% GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer NRGVACABNVTGTYCY 1e0 -1.436e+00 1.0000 3.0 6.12% 1518.0 3.44% CRE(bZIP)/Promoter/Homer CSGTGACGTCAC 1e0 -1.413e+00 1.0000 7.0 14.29% 4579.4 10.39% PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer TGGTACATTCCA 1e0 -1.399e+00 1.0000 11.0 22.45% 7851.1 17.81% NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer KCCACGTGAC 1e0 -1.390e+00 1.0000 18.0 36.73% 13796.6 31.29% E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer DNRCAGCTGY 1e0 -1.373e+00 1.0000 26.0 53.06% 20860.8 47.31% NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer YTGCCAAG 1e0 -1.371e+00 1.0000 27.0 55.10% 21757.8 49.35% JunD(bZIP)/K562-JunD-ChIP-Seq/Homer ATGACGTCATCN 1e0 -1.368e+00 1.0000 3.0 6.12% 1573.6 3.57% GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer VAGRACAKWCTGTYC 1e0 -1.365e+00 1.0000 4.0 8.16% 2313.0 5.25% PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer TGACCTTTGCCCCA 1e0 -1.347e+00 1.0000 18.0 36.73% 13895.6 31.51% Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer CTAATKGV 1e0 -1.323e+00 1.0000 24.0 48.98% 19205.3 43.56% Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer GGCMATGAAA 1e0 -1.323e+00 1.0000 15.0 30.61% 11372.9 25.79% Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer CTTTGATGTGSB 1e0 -1.288e+00 1.0000 5.0 10.20% 3172.0 7.19% Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer NATGASTCABNN 1e0 -1.283e+00 1.0000 5.0 10.20% 3177.8 7.21% FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer NVWTGTTTAC 1e0 -1.264e+00 1.0000 13.0 26.53% 9796.9 22.22% Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer ATTAACACCT 1e0 -1.261e+00 1.0000 26.0 53.06% 21145.0 47.96% KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer VDGGGYGGGGCY 1e0 -1.257e+00 1.0000 30.0 61.22% 24749.0 56.13% RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer TAGGGCAAAGGTCA 1e0 -1.247e+00 1.0000 21.0 42.86% 16752.7 37.99% RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer WAABTAGGTCAV 1e0 -1.226e+00 1.0000 2.0 4.08% 970.6 2.20% ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer GAGCCTGGTACTGWGCCTGR 1e0 -1.225e+00 1.0000 7.0 14.29% 4864.3 11.03% Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer TAATCCCN 1e0 -1.211e+00 1.0000 39.0 79.59% 33144.0 75.17% ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer CTGCCWVCTTTTRTA 1e0 -1.201e+00 1.0000 8.0 16.33% 5728.6 12.99% MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer DGCACACGTG 1e0 -1.183e+00 1.0000 15.0 30.61% 11692.7 26.52% LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer NGCTAATTAG 1e0 -1.182e+00 1.0000 18.0 36.73% 14295.4 32.42% AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer VTGACTCATC 1e0 -1.156e+00 1.0000 9.0 18.37% 6643.2 15.07% Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer NNATGASTCATH 1e0 -1.146e+00 1.0000 7.0 14.29% 4997.7 11.33% Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer ASWTCAAAGG 1e0 -1.143e+00 1.0000 4.0 8.16% 2567.4 5.82% Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer YCATYAATCA 1e0 -1.132e+00 1.0000 11.0 22.45% 8382.9 19.01% JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer RATGASTCAT 1e0 -1.129e+00 1.0000 7.0 14.29% 5026.8 11.40% RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer CGGTTGCCATGGCAAC 1e0 -1.127e+00 1.0000 3.0 6.12% 1801.6 4.09% Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer GTCATGCHTGRCTGS 1e0 -1.126e+00 1.0000 7.0 14.29% 5031.9 11.41% Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer NBWGATAAGR 1e0 -1.120e+00 1.0000 13.0 26.53% 10120.8 22.95% Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer AGGTGTGAAA 1e0 -1.110e+00 1.0000 14.0 28.57% 11006.9 24.96% PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer VNAGGKCAAAGGTCA 1e0 -1.110e+00 1.0000 18.0 36.73% 14483.3 32.85% ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer GGVTCTCGCGAGAAC 1e0 -1.106e+00 1.0000 3.0 6.12% 1824.4 4.14% MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer HWWGTCAGCAWWTTT 1e0 -1.103e+00 1.0000 4.0 8.16% 2618.0 5.94% Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer GGYAATGAAA 1e0 -1.090e+00 1.0000 8.0 16.33% 5932.8 13.46% Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer NDGTAATTAC 1e0 -1.088e+00 1.0000 9.0 18.37% 6780.2 15.38% Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer HTGCTGAGTCAT 1e0 -1.087e+00 1.0000 1.0 2.04% 368.4 0.84% AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer CCAGGAACAG 1e0 -1.082e+00 1.0000 39.0 79.59% 33458.4 75.88% Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer DATGASTCATHN 1e0 -1.082e+00 1.0000 8.0 16.33% 5948.0 13.49% HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer RTTATGYAAB 1e0 -1.078e+00 1.0000 10.0 20.41% 7649.5 17.35% Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer NGCGTGGGCGGR 1e0 -1.074e+00 1.0000 8.0 16.33% 5963.9 13.53% ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer ATTTCCCAGVAKSCY 1e0 -1.068e+00 1.0000 8.0 16.33% 5975.8 13.55% CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer GCTAATCC 1e0 -1.061e+00 1.0000 26.0 53.06% 21700.6 49.22% ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer RGRACASNSTGTYCYB 1e0 -1.059e+00 1.0000 4.0 8.16% 2676.3 6.07% Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer YTAATTRAWWCCAGATGT 1e0 -1.057e+00 1.0000 3.0 6.12% 1878.4 4.26% EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer NABTCCCWDGGGAVH 1e0 -1.057e+00 1.0000 20.0 40.82% 16385.9 37.16% Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer GTTGCCATGGCAACM 1e0 -1.044e+00 1.0000 3.0 6.12% 1892.1 4.29% Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer CCTGCTGAGH 1e0 -1.038e+00 1.0000 16.0 32.65% 12927.0 29.32% SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer AVCAGCTG 1e0 -1.036e+00 1.0000 42.0 85.71% 36367.2 82.48% RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer GGGRAARRGRMCAGMTG 1e0 -1.032e+00 1.0000 7.0 14.29% 5202.0 11.80% HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer CARRGKBCAAAGTYCA 1e0 -1.027e+00 1.0000 8.0 16.33% 6057.3 13.74% FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer TRTTTACTTW 1e0 -1.024e+00 1.0000 12.0 24.49% 9489.1 21.52% Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer CAAAGGTCAG 1e0 -1.023e+00 1.0000 29.0 59.18% 24501.9 55.57% Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer YGGCCCCGCCCC 1e0 -1.016e+00 1.0000 37.0 75.51% 31786.1 72.09% Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer NNNCTTTCCAGGAAA 1e0 -1.014e+00 1.0000 20.0 40.82% 16507.4 37.44% NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer WGGGGATTTCCC 1e0 -1.012e+00 1.0000 11.0 22.45% 8655.7 19.63% Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer TAATTAGN 1e0 -1.010e+00 1.0000 13.0 26.53% 10390.6 23.57% IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer CTTTCANTATGACTV 1e0 -1.004e+00 1.0000 2.0 4.08% 1149.6 2.61% NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer ATTTTCCATT 1e0 -1.002e+00 1.0000 13.0 26.53% 10410.0 23.61% bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer KCACGTGMCN 1e0 -1.001e+00 1.0000 22.0 44.90% 18315.6 41.54% Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer VNRVCAGCTGGY 1e0 -9.871e-01 1.0000 17.0 34.69% 13944.2 31.62% STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer NYTTCCWGGAAR 1e0 -9.806e-01 1.0000 14.0 28.57% 11336.0 25.71% FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer WWTRTAAACAVG 1e0 -9.801e-01 1.0000 10.0 20.41% 7869.8 17.85% FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer AGGTCANTGACCTB 1e0 -9.659e-01 1.0000 8.0 16.33% 6184.5 14.03% Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer MTGATGCAAT 1e0 -9.601e-01 1.0000 4.0 8.16% 2816.3 6.39% Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer VGCCATAAAA 1e0 -9.600e-01 1.0000 26.0 53.06% 22006.5 49.91% Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer YTAATYNRATTA 1e0 -9.599e-01 1.0000 5.0 10.20% 3651.8 8.28% Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer NCYAATAAAA 1e0 -9.474e-01 1.0000 18.0 36.73% 14940.5 33.88% Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer ATTGCATCAT 1e0 -9.389e-01 1.0000 3.0 6.12% 2020.7 4.58% AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer TGGCAGTTGG 1e0 -9.352e-01 1.0000 21.0 42.86% 17631.1 39.99% GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer CRGCTGBNGNSNNSAGATAA 1e0 -9.242e-01 1.0000 2.0 4.08% 1225.1 2.78% NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer GATGACTCAGCA 1e0 -9.105e-01 1.0000 1.0 2.04% 460.6 1.04% MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer GGCVGTTR 1e0 -9.086e-01 1.0000 25.0 51.02% 21277.8 48.26% HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer RTACGTGC 1e0 -9.074e-01 1.0000 20.0 40.82% 16832.8 38.18% Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer NRRTGACGTCAT 1e0 -8.968e-01 1.0000 6.0 12.24% 4615.3 10.47% Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer AAGGTGTKAA 1e0 -8.963e-01 1.0000 18.0 36.73% 15096.6 34.24% WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer MCTCCCMCRCAB 1e0 -8.940e-01 1.0000 18.0 36.73% 15103.5 34.25% DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer SSTAATTA 1e0 -8.883e-01 1.0000 10.0 20.41% 8093.4 18.36% Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer RGCCATTAAC 1e0 -8.855e-01 1.0000 38.0 77.55% 33068.2 75.00% PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer AAGAACATWHTGTTC 1e0 -8.847e-01 1.0000 3.0 6.12% 2092.4 4.75% c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer ATGACGTCATCY 1e0 -8.842e-01 1.0000 5.0 10.20% 3784.0 8.58% Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer YSTGGGTGGTCT 1e0 -8.714e-01 1.0000 6.0 12.24% 4666.9 10.58% MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer TGCTGACTCA 1e0 -8.666e-01 1.0000 11.0 22.45% 9023.5 20.46% Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer SNGCACCTGCHS 1e0 -8.635e-01 1.0000 12.0 24.49% 9908.8 22.47% Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer MAATCACTGC 1e0 -8.619e-01 1.0000 9.0 18.37% 7289.0 16.53% Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer AGGTGTCA 1e0 -8.607e-01 1.0000 36.0 73.47% 31326.2 71.05% RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer NWAACCACADNN 1e0 -8.588e-01 1.0000 10.0 20.41% 8169.7 18.53% CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer DRTGTTGCAA 1e0 -8.460e-01 1.0000 9.0 18.37% 7328.8 16.62% PSE(SNAPc)/K562-mStart-Seq/Homer WAVTCACCMTAASYDAAAAG 1e0 -8.452e-01 1.0000 6.0 12.24% 4720.9 10.71% FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer WAAGTAAACA 1e0 -8.392e-01 1.0000 11.0 22.45% 9099.0 20.64% HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer BSTTCTRGAABVTTCYAGAA 1e0 -8.276e-01 1.0000 3.0 6.12% 2174.0 4.93% Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer CVGTSCTCCC 1e0 -8.273e-01 1.0000 32.0 65.31% 27825.0 63.11% Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer AGGTGHCAGACA 1e0 -8.188e-01 1.0000 3.0 6.12% 2186.3 4.96% Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer BTBRAGTGSN 1e0 -8.137e-01 1.0000 26.0 53.06% 22492.6 51.01% Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer BSNTGTTTACWYWGN 1e0 -8.107e-01 1.0000 4.0 8.16% 3058.9 6.94% BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer CNNBRGCGCCCCCTGSTGGC 1e0 -8.057e-01 1.0000 8.0 16.33% 6554.4 14.86% CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer NTNATGCAAYMNNHTGMAAY 1e0 -7.984e-01 1.0000 2.0 4.08% 1363.4 3.09% Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer ADBTAATTAR 1e0 -7.978e-01 1.0000 18.0 36.73% 15416.6 34.96% THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer GGTCACCTGAGGTCA 1e0 -7.948e-01 1.0000 12.0 24.49% 10107.8 22.92% LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer CCTTTGATST 1e0 -7.946e-01 1.0000 8.0 16.33% 6582.9 14.93% Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer GCCACACCCA 1e0 -7.921e-01 1.0000 12.0 24.49% 10115.7 22.94% Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer TGTTKCCTAGCAACM 1e0 -7.867e-01 1.0000 18.0 36.73% 15454.0 35.05% STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer TTCCKNAGAA 1e0 -7.781e-01 1.0000 8.0 16.33% 6624.4 15.02% Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer CCATTGTTNY 1e0 -7.714e-01 1.0000 17.0 34.69% 14617.6 33.15% HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer TGCCAGCB 1e0 -7.675e-01 1.0000 30.0 61.22% 26238.9 59.51% Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer WATGCAAATGAG 1e0 -7.620e-01 1.0000 5.0 10.20% 4023.8 9.13% Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer KTGACCTTGA 1e0 -7.532e-01 1.0000 9.0 18.37% 7574.5 17.18% BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer DATGASTCAT 1e0 -7.492e-01 1.0000 7.0 14.29% 5815.2 13.19% Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer GGCCATAAATCA 1e0 -7.444e-01 1.0000 6.0 12.24% 4943.9 11.21% MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer RRCAGCTGYTSY 1e0 -7.388e-01 1.0000 13.0 26.53% 11169.9 25.33% KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer MKGGGYGTGGCC 1e0 -7.312e-01 1.0000 29.0 59.18% 25476.4 57.78% E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer BTKGGCGGGAAA 1e0 -7.145e-01 1.0000 20.0 40.82% 17496.8 39.68% RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer AGGTCAAGGTCA 1e0 -7.077e-01 1.0000 2.0 4.08% 1479.9 3.36% PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer VAGRACAKNCTGTBC 1e0 -7.058e-01 1.0000 24.0 48.98% 21103.4 47.86% NFY(CCAAT)/Promoter/Homer RGCCAATSRG 1e0 -7.041e-01 1.0000 15.0 30.61% 13070.2 29.64% Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer GATGACGTCA 1e0 -6.879e-01 1.0000 10.0 20.41% 8657.7 19.64% SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer CAAGGHCANV 1e0 -6.773e-01 1.0000 6.0 12.24% 5107.4 11.58% NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer CTGCGCATGCGC 1e0 -6.704e-01 1.0000 7.0 14.29% 6022.5 13.66% HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer NTATYGATCH 1e0 -6.526e-01 1.0000 6.0 12.24% 5171.5 11.73% Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer NHRTCACGACDN 1e0 -6.510e-01 1.0000 14.0 28.57% 12367.8 28.05% Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer TATTGAYY 1e0 -6.264e-01 1.0000 9.0 18.37% 7955.3 18.04% Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer BCCATTGTTC 1e0 -6.262e-01 1.0000 10.0 20.41% 8858.6 20.09% NRF(NRF)/Promoter/Homer STGCGCATGCGC 1e0 -6.119e-01 1.0000 7.0 14.29% 6190.4 14.04% Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer SCTGTCAVTCAV 1e0 -6.032e-01 1.0000 4.0 8.16% 3478.7 7.89% Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer NGRTGACGTCAY 1e0 -5.990e-01 1.0000 7.0 14.29% 6229.9 14.13% CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer VVATGACGTCAT 1e0 -5.957e-01 1.0000 5.0 10.20% 4413.6 10.01% Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer ANTTMRCASBNNNGTGYKAAN 1e0 -5.911e-01 1.0000 3.0 6.12% 2584.3 5.86% SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer ASWTCCTGBT 1e0 -5.884e-01 1.0000 16.0 32.65% 14410.3 32.68% Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer TTTTATGGCM 1e0 -5.870e-01 1.0000 23.0 46.94% 20699.4 46.94% GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATSTNDNNDSAGATAASN 1e0 -5.852e-01 1.0000 1.0 2.04% 726.7 1.65% X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer GGTTGCCATGGCAA 1e0 -5.737e-01 1.0000 2.0 4.08% 1686.0 3.82% Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer RTCACSCCAY 1e0 -5.702e-01 1.0000 3.0 6.12% 2628.6 5.96% Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer VCAKCTGGNNNCCAGMTGBN 1e0 -5.685e-01 1.0000 2.0 4.08% 1694.7 3.84% Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer NDATGASTCAYN 1e0 -5.646e-01 1.0000 6.0 12.24% 5418.8 12.29% HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer TTCTAGAABNTTCTA 1e0 -5.587e-01 1.0000 3.0 6.12% 2653.7 6.02% OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer ATTTGCATAACAATG 1e0 -5.449e-01 1.0000 2.0 4.08% 1736.2 3.94% TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer GAGGTCAAAGGTCA 1e0 -5.416e-01 1.0000 2.0 4.08% 1743.0 3.95% FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer WAAGTAAACA 1e0 -5.392e-01 1.0000 12.0 24.49% 10994.2 24.93% Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer SSRGCAGCTGCH 1e0 -5.208e-01 1.0000 19.0 38.78% 17411.8 39.49% Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer NNTGTGGATTSS 1e0 -4.989e-01 1.0000 7.0 14.29% 6558.8 14.87% PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer AGAGGAAGTG 1e0 -4.972e-01 1.0000 8.0 16.33% 7492.0 16.99% ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer ACAGGAAGTG 1e0 -4.914e-01 1.0000 18.0 36.73% 16650.0 37.76% HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer GYCATCMATCAT 1e0 -4.905e-01 1.0000 1.0 2.04% 844.4 1.91% Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer GYMATAAAAH 1e0 -4.869e-01 1.0000 7.0 14.29% 6601.7 14.97% Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer CACAGCAGGGGG 1e0 -4.830e-01 1.0000 10.0 20.41% 9397.0 21.31% FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer SCHTGTTTACAT 1e0 -4.736e-01 1.0000 7.0 14.29% 6650.2 15.08% PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer RTGATTKATRGN 1e0 -4.697e-01 1.0000 8.0 16.33% 7599.0 17.23% RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer TTGAMCTTTG 1e0 -4.647e-01 1.0000 29.0 59.18% 26628.2 60.39% Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer GTRGGTCASTGGGTCA 1e0 -4.621e-01 1.0000 2.0 4.08% 1901.3 4.31% ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer GTGACCTTGRVN 1e0 -4.601e-01 1.0000 11.0 22.45% 10417.6 23.63% Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer VCAGCTGYTG 1e0 -4.601e-01 1.0000 15.0 30.61% 14082.9 31.94% ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer GTGGGCCCCA 1e0 -4.593e-01 1.0000 4.0 8.16% 3860.3 8.75% Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer RACTACAACTCCCAGVAKGC 1e0 -4.539e-01 1.0000 2.0 4.08% 1919.0 4.35% Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer NRAACCRGTTYRAACCRGYT 1e0 -4.525e-01 1.0000 2.0 4.08% 1922.5 4.36% Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer RAACAATGGN 1e0 -4.428e-01 1.0000 11.0 22.45% 10496.7 23.81% Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer GGGGCTYGKCTGGGA 1e0 -4.291e-01 1.0000 6.0 12.24% 5875.7 13.33% BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer GNCACGTG 1e0 -4.194e-01 1.0000 20.0 40.82% 18831.8 42.71% KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer GGGGGTGTGTCC 1e0 -4.191e-01 1.0000 13.0 26.53% 12456.4 28.25% HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer TTTTATKRGG 1e0 -4.175e-01 1.0000 11.0 22.45% 10616.5 24.08% Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer WWATRTAAACAN 1e0 -4.138e-01 1.0000 9.0 18.37% 8770.3 19.89% IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer ACTGAAACCA 1e0 -4.116e-01 1.0000 5.0 10.20% 4983.4 11.30% Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer DAGGTGTBAA 1e0 -4.073e-01 1.0000 14.0 28.57% 13437.1 30.47% Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer YCTTTGTTCC 1e0 -4.004e-01 1.0000 9.0 18.37% 8833.0 20.03% ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer TGGAACAGMA 1e0 -3.998e-01 1.0000 12.0 24.49% 11632.4 26.38% ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer GTCWGCTGTYYCTCT 1e0 -3.988e-01 1.0000 1.0 2.04% 989.9 2.24% NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer GGAAATTCCC 1e0 -3.977e-01 1.0000 1.0 2.04% 991.2 2.25% PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer RGGTCTCTAACY 1e0 -3.951e-01 1.0000 4.0 8.16% 4068.9 9.23% ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer RGGGCACTAACY 1e0 -3.930e-01 1.0000 10.0 20.41% 9805.3 22.24% RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer SAAACCACAG 1e0 -3.898e-01 1.0000 8.0 16.33% 7939.1 18.01% Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer TGACCTTTNCNT 1e0 -3.746e-01 1.0000 2.0 4.08% 2113.9 4.79% Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer VVRRAACAATGG 1e0 -3.738e-01 1.0000 3.0 6.12% 3143.8 7.13% c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer VVCCACGTGG 1e0 -3.702e-01 1.0000 7.0 14.29% 7077.9 16.05% NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer CYTGGCABNSTGCCAR 1e0 -3.690e-01 1.0000 6.0 12.24% 6120.1 13.88% TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer YCWGGAATGY 1e0 -3.593e-01 1.0000 7.0 14.29% 7129.0 16.17% AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer ATGCCCTGAGGC 1e0 -3.575e-01 1.0000 19.0 38.78% 18292.0 41.48% TATA-Box(TBP)/Promoter/Homer CCTTTTAWAGSC 1e0 -3.488e-01 1.0000 15.0 30.61% 14690.0 33.32% MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer RTCATGTGAC 1e0 -3.434e-01 1.0000 11.0 22.45% 11007.0 24.96% Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer VGCTGWCAVB 1e0 -3.371e-01 1.0000 19.0 38.78% 18421.5 41.78% THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer TRAGGTCA 1e0 -3.269e-01 1.0000 37.0 75.51% 34323.4 77.84% Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer NAHCAGCTGD 1e0 -3.232e-01 1.0000 16.0 32.65% 15772.8 35.77% FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer NYYTGTTTACHN 1e0 -3.183e-01 1.0000 4.0 8.16% 4363.4 9.90% NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer GGGGGAATCCCC 1e0 -3.182e-01 1.0000 3.0 6.12% 3338.1 7.57% Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer SCCTAGCAACAG 1e0 -3.152e-01 1.0000 4.0 8.16% 4377.0 9.93% STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer ABTTCYYRRGAA 1e0 -3.028e-01 1.0000 6.0 12.24% 6434.4 14.59% PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer GSCTGTCACTCA 1e0 -3.012e-01 1.0000 1.0 2.04% 1195.9 2.71% YY1(Zf)/Promoter/Homer CAAGATGGCGGC 1e0 -2.918e-01 1.0000 1.0 2.04% 1219.4 2.77% IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer GRAASTGAAAST 1e0 -2.910e-01 1.0000 4.0 8.16% 4484.7 10.17% Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer CYHATAAAAN 1e0 -2.759e-01 1.0000 22.0 44.90% 21564.9 48.91% EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer GTCCCCWGGGGA 1e0 -2.741e-01 1.0000 21.0 42.86% 20677.4 46.90% Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer NRYTTCCGGH 1e0 -2.727e-01 1.0000 20.0 40.82% 19784.7 44.87% Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer CCATTGTATGCAAAT 1e0 -2.721e-01 1.0000 1.0 2.04% 1272.1 2.88% E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer VDTTTCCCGCCA 1e0 -2.694e-01 1.0000 4.0 8.16% 4587.1 10.40% LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer AAGACCCYYN 1e0 -2.685e-01 1.0000 29.0 59.18% 27820.4 63.09% Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer SVYTTCCNGGAARB 1e0 -2.567e-01 1.0000 9.0 18.37% 9641.3 21.87% CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer CCATATATGGNM 1e0 -2.512e-01 1.0000 3.0 6.12% 3621.5 8.21% E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer CWGGCGGGAA 1e0 -2.489e-01 1.0000 8.0 16.33% 8720.9 19.78% PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer YCCDNTCCAGGTTTT 1e0 -2.484e-01 1.0000 15.0 30.61% 15387.9 34.90% PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer GGAAGTGAAAST 1e0 -2.472e-01 1.0000 2.0 4.08% 2536.2 5.75% Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer GKVTCADRTTWC 1e0 -2.469e-01 1.0000 2.0 4.08% 2537.5 5.75% Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer GGGGGGGG 1e0 -2.468e-01 1.0000 31.0 63.27% 29719.4 67.40% STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer NATTTCCNGGAAAT 1e0 -2.460e-01 1.0000 3.0 6.12% 3646.5 8.27% Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer GWAAYHTGAKMC 1e0 -2.449e-01 1.0000 10.0 20.41% 10689.4 24.24% COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer AGRGGTCA 1e0 -2.440e-01 1.0000 21.0 42.86% 20919.7 47.44% GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer AAACYKGTTWDACMRGTTTB 1e0 -2.365e-01 1.0000 3.0 6.12% 3693.9 8.38% Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer MACAGGAAGT 1e0 -2.339e-01 1.0000 3.0 6.12% 3706.7 8.41% Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer SSCMATWAAA 1e0 -2.256e-01 1.0000 6.0 12.24% 6887.9 15.62% Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer CCATTGTTYB 1e0 -2.183e-01 1.0000 6.0 12.24% 6937.8 15.73% NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer NVCACGTG 1e0 -2.121e-01 1.0000 17.0 34.69% 17551.0 39.80% Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer CCWTTGTYYB 1e0 -2.112e-01 1.0000 15.0 30.61% 15703.8 35.62% ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer GRTGMTRGAGCC 1e0 -2.018e-01 1.0000 8.0 16.33% 9067.7 20.56% Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer AGGTGTGAAM 1e0 -1.958e-01 1.0000 10.0 20.41% 11083.2 25.14% Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer DGTAAACA 1e0 -1.950e-01 1.0000 6.0 12.24% 7105.4 16.11% IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer GAAASYGAAASY 1e0 -1.913e-01 1.0000 1.0 2.04% 1545.7 3.51% Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer NRYTTCCGGY 1e0 -1.882e-01 1.0000 13.0 26.53% 14036.7 31.83% PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer GTCACGCTCSCTGM 1e0 -1.842e-01 1.0000 1.0 2.04% 1575.4 3.57% Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer NANTGCSGCA 1e0 -1.801e-01 1.0000 9.0 18.37% 10244.3 23.23% ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer GARTGGTCATCGCCC 1e0 -1.769e-01 1.0000 1.0 2.04% 1607.5 3.65% Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer BTCAAGGTCA 1e0 -1.665e-01 1.0000 7.0 14.29% 8365.1 18.97% Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer CCWTTGTY 1e0 -1.601e-01 1.0000 15.0 30.61% 16220.9 36.79% Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer TGATTRATGGCY 1e0 -1.588e-01 1.0000 1.0 2.04% 1693.7 3.84% ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer GNMCAGGTGTGC 1e0 -1.563e-01 1.0000 14.0 28.57% 15320.7 34.75% VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer ARAGGTCANWGAGTTCANNN 1e0 -1.555e-01 1.0000 2.0 4.08% 3007.6 6.82% Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer BAACAGCTGT 1e0 -1.552e-01 1.0000 8.0 16.33% 9487.8 21.52% GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer RACCGGAAGT 1e0 -1.508e-01 1.0000 14.0 28.57% 15383.2 34.89% ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer AACCGGAAGT 1e0 -1.502e-01 1.0000 20.0 40.82% 20953.0 47.52% E2F(E2F)/Hela-CellCycle-Expression/Homer TTSGCGCGAAAA 1e0 -1.473e-01 1.0000 1.0 2.04% 1753.5 3.98% n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer VRCCACGTGG 1e0 -1.456e-01 1.0000 9.0 18.37% 10591.9 24.02% Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer HACTTCCGGY 1e0 -1.442e-01 1.0000 12.0 24.49% 13549.7 30.73% Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer KGTTGCCATGGCAA 1e0 -1.399e-01 1.0000 2.0 4.08% 3114.7 7.06% Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer BTCAAGGTCA 1e0 -1.325e-01 1.0000 5.0 10.20% 6600.6 14.97% Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer GCCACRCCCACY 1e0 -1.306e-01 1.0000 11.0 22.45% 12743.7 28.90% Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer GGCCYCCTGCTGDGH 1e0 -1.279e-01 1.0000 11.0 22.45% 12779.0 28.98% IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer GAAAGTGAAAGT 1e0 -1.251e-01 1.0000 1.0 2.04% 1886.0 4.28% AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer SCCTSAGGSCAW 1e0 -1.170e-01 1.0000 21.0 42.86% 22302.7 50.58% Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer YCTTATCTBN 1e0 -1.150e-01 1.0000 7.0 14.29% 8915.9 20.22% GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATAASR 1e0 -1.150e-01 1.0000 12.0 24.49% 13928.6 31.59% NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer SARTGGAAAAWRTGAGTCAB 1e0 -1.146e-01 1.0000 1.0 2.04% 1956.9 4.44% Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer BCCWTTGTBYKV 1e0 -1.122e-01 1.0000 15.0 30.61% 16843.0 38.20% Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer SCTGTCAMTCAN 1e0 -1.110e-01 1.0000 2.0 4.08% 3347.4 7.59% Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer TTAATTNAATTA 1e0 -1.067e-01 1.0000 1.0 2.04% 2014.1 4.57% E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer GGCGGGAAAH 1e0 -1.054e-01 1.0000 12.0 24.49% 14071.1 31.91% EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer ATTTCCTGTN 1e0 -1.031e-01 1.0000 7.0 14.29% 9073.2 20.58% Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer CGGTCACSCCAC 1e0 -9.912e-02 1.0000 1.0 2.04% 2074.7 4.71% ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer AVCCGGAAGT 1e0 -9.461e-02 1.0000 10.0 20.41% 12268.8 27.82% Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer CTTCCGGGAA 1e0 -9.205e-02 1.0000 6.0 12.24% 8170.5 18.53% GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer CGTGGGTGGTCC 1e0 -8.999e-02 1.0000 1.0 2.04% 2153.2 4.88% HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer TGATKGATGR 1e0 -8.955e-02 1.0000 1.0 2.04% 2157.3 4.89% Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer SAGATAAGRV 1e0 -8.924e-02 1.0000 4.0 8.16% 5992.3 13.59% Sp1(Zf)/Promoter/Homer GGCCCCGCCCCC 1e0 -7.677e-02 1.0000 12.0 24.49% 14572.5 33.05% TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer AGATAAGANN 1e0 -7.548e-02 1.0000 15.0 30.61% 17492.3 39.67% USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer SGTCACGTGR 1e0 -7.376e-02 1.0000 5.0 10.20% 7362.6 16.70% Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer ACTTCCKGKT 1e0 -7.359e-02 1.0000 13.0 26.53% 15613.9 35.41% Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer GGTGYTGACAGS 1e0 -7.270e-02 1.0000 1.0 2.04% 2328.5 5.28% GFY(?)/Promoter/Homer ACTACAATTCCC 1e0 -7.226e-02 1.0000 1.0 2.04% 2333.5 5.29% Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer CHCAGCRGGRGG 1e0 -6.658e-02 1.0000 8.0 16.33% 10739.5 24.36% c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer VCCACGTG 1e0 -6.360e-02 1.0000 7.0 14.29% 9744.7 22.10% Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer NNYTAATTAR 1e0 -6.241e-02 1.0000 8.0 16.33% 10829.8 24.56% SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer AAAGRGGAAGTG 1e0 -6.129e-02 1.0000 2.0 4.08% 3937.0 8.93% ETS(ETS)/Promoter/Homer AACCGGAAGT 1e0 -5.885e-02 1.0000 5.0 10.20% 7644.0 17.34% p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer NNDRCATGYCYNRRCATGYH 1e0 -5.794e-02 1.0000 2.0 4.08% 3991.5 9.05% MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer TTCAAAWTAAAAGTC 1e0 -5.655e-02 1.0000 1.0 2.04% 2535.8 5.75% IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer AGTTTCAKTTTC 1e0 -5.625e-02 1.0000 2.0 4.08% 4021.0 9.12% CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer NGYCATAAAWCH 1e0 -5.544e-02 1.0000 6.0 12.24% 8838.6 20.05% Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer BBCTTATCTS 1e0 -5.475e-02 1.0000 4.0 8.16% 6571.6 14.90% PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer ACTTTCACTTTC 1e0 -5.372e-02 1.0000 4.0 8.16% 6593.6 14.95% Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer NNAYTTCCTGHN 1e0 -4.748e-02 1.0000 11.0 22.45% 14290.6 32.41% bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer KCACGTGMCN 1e0 -4.616e-02 1.0000 3.0 6.12% 5536.4 12.56% ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer AGGCCTAG 1e0 -4.177e-02 1.0000 26.0 53.06% 28273.7 64.12% ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer ACCGGAAGTG 1e0 -4.083e-02 1.0000 17.0 34.69% 20302.6 46.04% EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer VACAGGAAAT 1e0 -3.799e-02 1.0000 6.0 12.24% 9313.9 21.12% CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer GHCACGTG 1e0 -3.487e-02 1.0000 5.0 10.20% 8274.2 18.77% ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer TTAACCCTTTVNKKN 1e0 -2.912e-02 1.0000 1.0 2.04% 3083.8 6.99% COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer GKBCARAGGTCA 1e0 -2.220e-02 1.0000 14.0 28.57% 18291.3 41.48% Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer RCCACGTGGYYN 1e0 -2.131e-02 1.0000 5.0 10.20% 8840.8 20.05% ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer ACAGGAAGTG 1e0 -2.065e-02 1.0000 18.0 36.73% 22158.2 50.25% EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer NRBCARRGGTCA 1e0 -1.969e-02 1.0000 12.0 24.49% 16478.1 37.37% ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer AGGCCTRG 1e0 -1.870e-02 1.0000 17.0 34.69% 21361.7 48.45% ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer AAGGKGRCGCAGGCA 1e0 -1.437e-02 1.0000 1.0 2.04% 3664.3 8.31% ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer NGNTCTAGAACCNGV 1e0 -8.639e-03 1.0000 2.0 4.08% 5780.1 13.11% Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer GTCACGTGGT 1e0 -5.643e-03 1.0000 1.0 2.04% 4426.0 10.04% HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer TACGTGCV 1e0 -4.887e-03 1.0000 1.0 2.04% 4542.0 10.30% ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer GGAACAGCCG 1e0 -3.491e-03 1.0000 5.0 10.20% 10741.0 24.36% ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer ANCAGGAAGT 1e0 -3.265e-03 1.0000 4.0 8.16% 9522.1 21.60% EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer AVCAGGAAGT 1e0 -3.196e-03 1.0000 11.0 22.45% 17564.5 39.84% ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer ACVAGGAAGT 1e0 -1.620e-04 1.0000 3.0 6.12% 10727.5 24.33% TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer GTCACGTGACYV 1e0 -0.000e+00 1.0000 0.0 0.00% 1423.8 3.23% GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer AGATGKDGAGATAAG 1e0 -0.000e+00 1.0000 0.0 0.00% 703.5 1.60% ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer GGGTTTTGAAGGATGARTAGGAGTT 1e0 -0.000e+00 1.0000 0.0 0.00% 23.4 0.05% OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer YATGCATATRCATRT 1e0 -0.000e+00 1.0000 0.0 0.00% 875.5 1.99% CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer TGCAGTTCCMVNWRTGGCCA 1e0 -0.000e+00 1.0000 0.0 0.00% 176.7 0.40% p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer ACATGCCCGGGCAT 1e0 -0.000e+00 1.0000 0.0 0.00% 216.1 0.49% ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer AGTTTCASTTTC 1e0 -0.000e+00 1.0000 0.0 0.00% 907.1 2.06% ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer RHHCAGAGAGGB 1e0 -0.000e+00 1.0000 0.0 0.00% 616.3 1.40% Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer ACTYKNATTCGTGNTACTTC 1e0 -0.000e+00 1.0000 0.0 0.00% 581.8 1.32% ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer YTKGATAHAGTATTCTWGGTNGGCA 1e0 -0.000e+00 1.0000 0.0 0.00% 791.2 1.79% EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer GGYAGCAYDTGCTDCCCNNN 1e0 -0.000e+00 1.0000 0.0 0.00% 232.9 0.53% ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer CCTCATGGTGYCYTWYTCCCTTGTG 1e0 -0.000e+00 1.0000 0.0 0.00% 248.7 0.56% p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer RRCATGYCYRGRCATGYYYN 1e0 -0.000e+00 1.0000 0.0 0.00% 841.6 1.91% p53(p53)/Saos-p53-ChIP-Seq/Homer RRCATGYCYRGRCATGYYYN 1e0 -0.000e+00 1.0000 0.0 0.00% 841.6 1.91% FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer AGTAAACAAAAAAGAACAND 1e0 -0.000e+00 1.0000 0.0 0.00% 560.9 1.27% Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer AWWNTGCTGAGTCAT 1e0 -0.000e+00 1.0000 0.0 0.00% 423.6 0.96% Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer TGWAAYCTGABACCB 1e0 -0.000e+00 1.0000 0.0 0.00% 550.5 1.25% RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer RGGTCADNNAGAGGTCAV 1e0 -0.000e+00 1.0000 0.0 0.00% 576.4 1.31% Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer NTAATTDGCYAATTANNWWD 1e0 -0.000e+00 1.0000 0.0 0.00% 201.3 0.46% LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer RGGTTACTANAGGTCA 1e0 -0.000e+00 1.0000 0.0 0.00% 565.5 1.28% Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer TAAYCYAATCAA 1e0 -0.000e+00 1.0000 0.0 0.00% 744.7 1.69% ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer GCACAYAGTAGGKCY 1e0 -0.000e+00 1.0000 0.0 0.00% 554.4 1.26% p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer NRRRCAWGTCCDGRCATGYY 1e0 -0.000e+00 1.0000 0.0 0.00% 542.3 1.23% RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer AGGTCAAGGTCA 1e0 -0.000e+00 1.0000 0.0 0.00% 361.5 0.82% OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer ATGAATATTCATGAG 1e0 -0.000e+00 1.0000 0.0 0.00% 107.9 0.24% T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer ACTTTCGTTTCT 1e0 -0.000e+00 1.0000 0.0 0.00% 107.8 0.24% NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer AWWWTGCTGAGTCAT 1e0 -0.000e+00 1.0000 0.0 0.00% 345.3 0.78% DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer BCWGATTCAATCAAN 1e0 0.000e+00 1.0000 0.0 0.00% 17.2 0.04% GFX(?)/Promoter/Homer ATTCTCGCGAGA 1e0 0.000e+00 1.0000 0.0 0.00% 614.6 1.39% OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer ATGAATWATTCATGA 1e0 0.000e+00 1.0000 0.0 0.00% 228.5 0.52% GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NAGATWNBNATCTNN 1e0 0.000e+00 1.0000 0.0 0.00% 645.8 1.46% DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer NWTAAYCYAATCAWN 1e0 0.000e+00 1.0000 0.0 0.00% 484.8 1.10% GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer NNNNNBAGATAWYATCTVHN 1e0 0.000e+00 1.0000 0.0 0.00% 1208.0 2.74% E-box(bHLH)/Promoter/Homer SSGGTCACGTGA 1e0 0.000e+00 1.0000 0.0 0.00% 2040.1 4.63% ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer AGAAATGACTTCCCT 1e0 0.000e+00 1.0000 0.0 0.00% 38.8 0.09% ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer RCAGGATGTGGT 1e0 0.000e+00 1.0000 0.0 0.00% 1781.5 4.04% ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer AGGAARCAGCTG 1e0 0.000e+00 1.0000 0.0 0.00% 1347.3 3.06% ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer GNCTGTASTRNTGBCTCHTT 1e0 0.000e+00 1.0000 0.0 0.00% 199.7 0.45%