Information for 8-GAGAGCGAGA (Motif 8)

T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A
Reverse Opposite:
A G C T A G T C A G C T A G T C A T C G A G T C A G C T A G T C A C G T A T G C
p-value:1e-5
log p-value:-1.381e+01
Information Content per bp:1.777
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif32.65%
Number of Background Sequences with motif3609.7
Percentage of Background Sequences with motif8.19%
Average Position of motif in Targets529.0 +/- 264.6bp
Average Position of motif in Background550.1 +/- 311.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGAGCGAGA-
NAGAGAAAGNA
 T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGCGAGA
VTGYGKGGGAGK
 A C G T A C G T T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

Wt1/MA1627.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGCGAGA--
GNGTGGGGGAGGNG
 A C G T A C G T T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T
T C A G A C G T T A C G G A C T T A C G C A T G T C A G T C A G T A C G G T C A A T C G C A T G T C A G C T A G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGAGCGAGA
RHHCAGAGAGGB-
 A C G T A C G T A C G T T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGAGCGAGA--
--GGGCGGGACC
 T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T
A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGAGCGAGA----
TGCGGAGTGGGACTGG
 A C G T A C G T T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAGAGCGAGA---
---GGCGGGAARN
 T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGAGCGAGA-----
TTGACCGAGAATTCC
 T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZNF135/MA1587.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGAGCGAGA
TCAGGAGGTCGAGG
 A C G T A C G T A C G T A C G T T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGAGCGAGA-----
NNNACCGAGAGTNNN
 T A C G C G T A A C T G C T G A A C T G T A G C C T A G T C G A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T