Information for 6-GCACTAAGAT (Motif 6)

C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
Reverse Opposite:
C T G A A G C T T G A C G C A T C G A T C T G A A T C G C G A T A T C G G T A C
p-value:1e-6
log p-value:-1.608e+01
Information Content per bp:1.688
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif2250.6
Percentage of Background Sequences with motif5.10%
Average Position of motif in Targets507.4 +/- 250.6bp
Average Position of motif in Background473.0 +/- 283.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCACTAAGAT
GCACTTAA--
 C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCACTAAGAT
AAGCAATAAAAA
 A C G T A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCACTAAGAT
AAGCACTTAA--
 A C G T A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCACTAAGAT
RGGGCACTAACY-
 A C G T A C G T A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCACTAAGAT
GGAACAAAGR-
 A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCACTAAGAT
TTATGTACTAATAA
 A C G T A C G T A C G T A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

HOXD9/MA0913.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCACTAAGAT
GCAATAAAAC
 C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCACTAAGAT
AAAACAAAGAA
 A C G T C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCACTAAGAT-------
---CTAATATTGCTAAA
 C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCACTAAGAT-------
---CTAATATTGCTAAA
 C A T G T A G C G C T A T A G C A G C T G C T A C G T A A C T G T C G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A