Information for 9-AGATCTCTTT (Motif 9)

C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.459e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif19.15%
Number of Background Sequences with motif2176.2
Percentage of Background Sequences with motif5.13%
Average Position of motif in Targets466.1 +/- 175.2bp
Average Position of motif in Background466.2 +/- 302.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGATCTCTTT--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGATCTCTTT
AAGATATCCTT
 A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGATCTCTTT---
NNGTANTGTTTTNC
 A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PRDM4/MA1647.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGATCTCTTT---
--GTCTGTTTCTA
 C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGATCTCTTT---
NNAATTCTCGNTNAN
 A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

ZNF652/MA1657.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATCTCTTT-
NTTAACTCTTTN
 A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGATCTCTTT----
AAAACATCGTTTTTAAG
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGATCTCTTT
TAAGGCGTCTTG
 A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGATCTCTTT-------
--TTCTATTTTTAGNNN
 C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGATCTCTTT--
AGGVNCCTTTGT
 C G T A A C T G C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T